Gene annotation
Transcriptome id Sobic.010G006200.1
Synonym ATHEXPALPHA1.25, EXPA18, EXP18, Sb10g000790, ATEXP18, ATEXPA18
Functional annotation expansin precursor, putative, expressed
UniProt C5Z277
Pfam PF01357 PF03330
Panther DB PTHR31867 PTHR31867:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62980 : expansin A18
RAP-DB (Rice) LOC_Os06g01920.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a050298
Brachypodium KQK06963 , KQJ96857
Barley HORVU1Hr1G036910.1 , HORVU4Hr1G072410.1 , HORVU1Hr1G051640.1 , HORVU7Hr1G002440.4 , HORVU7Hr1G002440.3 , HORVU7Hr1G002440.2 , HORVU7Hr1G002440.1
Wheat TraesCS4A02G470100 , TraesCS4B02G271200 , TraesCS4A02G339200 , TraesCS1B02G156700 , TraesCS1B02G214200 , TraesCS5B02G548500 , TraesCS4A02G034300 , TraesCS1D02G203100 , TraesCS3D02G175800 , TraesCS4A02G034400 , TraesCS5D02G535500 , TraesCS4D02G270100 , TraesCS3A02G165900 , TraesCS1A02G199400 , TraesCS3D02G176000 , TraesCS1B02G214300 , TraesCS7A02G022400 , TraesCS3A02G160000 , TraesCS3B02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G146300 DEFL9 - Defensin and Defensin-like DEFL family, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
3 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
4 Sobic.001G338900 cytochrome P450, putative, expressed -
5 Sobic.001G314100 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.004G106000 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G314600 expansin precursor, putative, expressed -
9 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G323000 SCP-like extracellular protein, expressed -
11 Sobic.003G059000 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
12 Sobic.001G301400 expansin precursor, putative, expressed -
13 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
14 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.005G161200 ent-kaurene synthase, chloroplast precursor, putative, expressed K04120: ent-copalyl diphosphate synthase
K14043: syn-copalyl-diphosphate synthase
16 Sobic.008G158266 - -
17 Sobic.010G021700 eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
19 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
20 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic010G006200 Sobic010G006200 Sobic010G146300 Sobic010G146300 Sobic010G006200--Sobic010G146300 Sobic002G412600 Sobic002G412600 Sobic010G006200--Sobic002G412600 Sobic002G122400 Sobic002G122400 Sobic010G006200--Sobic002G122400 Sobic001G338900 Sobic001G338900 Sobic010G006200--Sobic001G338900 Sobic001G314100 Sobic001G314100 Sobic010G006200--Sobic001G314100 Sobic001G293000 Sobic001G293000 Sobic010G006200--Sobic001G293000 Sobic004G106000 Sobic004G106000 Sobic010G006200--Sobic004G106000 Sobic001G314600 Sobic001G314600 Sobic010G006200--Sobic001G314600 Sobic002G307900 Sobic002G307900 Sobic010G006200--Sobic002G307900 Sobic010G146300--Sobic002G412600 Sobic010G146300--Sobic001G293000 Sobic010G146300--Sobic010G006200 Sobic010G146300--Sobic002G122400 Sobic010G146300--Sobic004G106000 Sobic005G163800 Sobic005G163800 Sobic010G146300--Sobic005G163800 Sobic010G146300--Sobic002G307900 Sobic007G085500 Sobic007G085500 Sobic010G146300--Sobic007G085500 Sobic010G146300--Sobic001G314100 Sobic002G412600--Sobic002G122400 Sobic002G412600--Sobic010G146300 Sobic002G412600--Sobic001G293000 Sobic002G412600--Sobic010G006200 Sobic002G412600--Sobic005G163800 Sobic006G170600 Sobic006G170600 Sobic002G412600--Sobic006G170600 Sobic002G003700 Sobic002G003700 Sobic002G412600--Sobic002G003700 Sobic002G329200 Sobic002G329200 Sobic002G412600--Sobic002G329200 Sobic002G412600--Sobic004G106000 Sobic002G122400--Sobic002G412600 Sobic002G122400--Sobic010G006200 Sobic002G122400--Sobic002G003700 Sobic002G122400--Sobic010G146300 Sobic006G150100 Sobic006G150100 Sobic002G122400--Sobic006G150100 Sobic002G122400--Sobic006G170600 Sobic010G139100 Sobic010G139100 Sobic002G122400--Sobic010G139100 Sobic002G122400--Sobic001G293000 Sobic002G122400--Sobic002G307900 Sobic001G338900--Sobic001G314100 Sobic001G338900--Sobic010G006200 Sobic005G161200 Sobic005G161200 Sobic001G338900--Sobic005G161200 Sobic004G323000 Sobic004G323000 Sobic001G338900--Sobic004G323000 Sobic001G338900--Sobic001G314600 Sobic001G301400 Sobic001G301400 Sobic001G338900--Sobic001G301400 Sobic003G059000 Sobic003G059000 Sobic001G338900--Sobic003G059000 Sobic001G338900--Sobic002G122400 Sobic010G174100 Sobic010G174100 Sobic001G338900--Sobic010G174100 Sobic001G314100--Sobic001G338900 Sobic001G314100--Sobic001G301400 Sobic001G314100--Sobic004G323000 Sobic001G314100--Sobic010G006200 Sobic001G314100--Sobic002G307900 Sobic010G021700 Sobic010G021700 Sobic001G314100--Sobic010G021700 Sobic002G391200 Sobic002G391200 Sobic001G314100--Sobic002G391200 Sobic001G314100--Sobic010G174100 Sobic001G314100--Sobic002G122400 Sobic001G293000--Sobic002G412600 Sobic001G293000--Sobic010G146300 Sobic001G293000--Sobic010G006200 Sobic001G293000--Sobic002G122400 Sobic001G293000--Sobic005G163800 Sobic001G293000--Sobic004G106000 Sobic001G293000--Sobic006G170600 Sobic006G202600 Sobic006G202600 Sobic001G293000--Sobic006G202600 Sobic001G293000--Sobic002G329200 Sobic004G106000--Sobic010G146300 Sobic004G106000--Sobic010G006200 Sobic004G106000--Sobic001G293000 Sobic004G106000--Sobic002G412600 Sobic004G106000--Sobic002G122400 Sobic010G074800 Sobic010G074800 Sobic004G106000--Sobic010G074800 Sobic004G106000--Sobic001G338900 Sobic004G106000--Sobic001G314100 Sobic008G158266 Sobic008G158266 Sobic004G106000--Sobic008G158266 Sobic001G314600--Sobic003G059000 Sobic001G314600--Sobic010G006200 Sobic003G132400 Sobic003G132400 Sobic001G314600--Sobic003G132400 Sobic001G314600--Sobic002G122400 Sobic001G314600--Sobic002G003700 Sobic001G314600--Sobic006G150100 Sobic009G035900 Sobic009G035900 Sobic001G314600--Sobic009G035900 Sobic003G349400 Sobic003G349400 Sobic001G314600--Sobic003G349400 Sobic007G019900 Sobic007G019900 Sobic001G314600--Sobic007G019900 Sobic002G307900--Sobic001G301400 Sobic002G307900--Sobic010G021700 Sobic002G307900--Sobic002G391200 Sobic001G308600 Sobic001G308600 Sobic002G307900--Sobic001G308600 Sobic002G307900--Sobic001G314100 Sobic009G096300 Sobic009G096300 Sobic002G307900--Sobic009G096300 Sobic002G307900--Sobic010G006200 Sobic002G307900--Sobic002G122400 Sobic002G307900--Sobic010G139100
Octagon: transcription factors


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