Gene annotation
Transcriptome id Sobic.002G329200.1
Synonym Sb02g035570
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5XAT1
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G32300 : uclacyanin 1
RAP-DB (Rice) LOC_Os07g35860.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048303
Brachypodium -
Barley HORVU4Hr1G072480.1 , HORVU2Hr1G044220.1
Wheat TraesCS2D02G221300 , TraesCS2A02G215700 , TraesCS2B02G240700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G318300 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
3 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
4 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.003G059000 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
6 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G085900 expressed protein -
9 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
11 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.010G127800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
14 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
15 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.005G127400 expressed protein -
17 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.006G100501 - -
19 Sobic.004G110700 DNA binding protein, putative, expressed -
20 Sobic.001G314600 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic002G329200 Sobic002G329200 Sobic001G318300 Sobic001G318300 Sobic002G329200--Sobic001G318300 Sobic003G132400 Sobic003G132400 Sobic002G329200--Sobic003G132400 Sobic006G170600 Sobic006G170600 Sobic002G329200--Sobic006G170600 Sobic006G150100 Sobic006G150100 Sobic002G329200--Sobic006G150100 Sobic003G059000 Sobic003G059000 Sobic002G329200--Sobic003G059000 Sobic002G003700 Sobic002G003700 Sobic002G329200--Sobic002G003700 Sobic003G399600 Sobic003G399600 Sobic002G329200--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic002G329200--Sobic002G085900 Sobic006G225500 Sobic006G225500 Sobic002G329200--Sobic006G225500 Sobic001G318300--Sobic003G132400 Sobic001G318300--Sobic002G329200 Sobic005G127400 Sobic005G127400 Sobic001G318300--Sobic005G127400 Sobic001G318300--Sobic003G059000 Sobic001G318300--Sobic006G150100 Sobic001G318300--Sobic006G225500 Sobic003G349400 Sobic003G349400 Sobic001G318300--Sobic003G349400 Sobic001G318300--Sobic006G170600 Sobic009G035900 Sobic009G035900 Sobic001G318300--Sobic009G035900 Sobic003G132400--Sobic001G318300 Sobic003G132400--Sobic002G003700 Sobic003G132400--Sobic002G329200 Sobic003G132400--Sobic006G150100 Sobic003G132400--Sobic005G127400 Sobic003G132400--Sobic009G035900 Sobic003G132400--Sobic003G059000 Sobic003G132400--Sobic003G349400 Sobic003G132400--Sobic006G170600 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G202600 Sobic006G202600 Sobic006G170600--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic006G170600--Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic006G170600--Sobic004G180700 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic004G110700 Sobic004G110700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500 Sobic001G314600 Sobic001G314600 Sobic003G059000--Sobic001G314600 Sobic003G059000--Sobic001G318300 Sobic003G059000--Sobic002G329200 Sobic003G059000--Sobic003G132400 Sobic001G308600 Sobic001G308600 Sobic003G059000--Sobic001G308600 Sobic003G059000--Sobic006G150100 Sobic007G021700 Sobic007G021700 Sobic003G059000--Sobic007G021700 Sobic001G542000 Sobic001G542000 Sobic003G059000--Sobic001G542000 Sobic010G006200 Sobic010G006200 Sobic003G059000--Sobic010G006200 Sobic002G003700--Sobic006G150100 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic003G399600--Sobic006G225500 Sobic003G269600 Sobic003G269600 Sobic003G399600--Sobic003G269600 Sobic002G326500 Sobic002G326500 Sobic003G399600--Sobic002G326500 Sobic003G140700 Sobic003G140700 Sobic003G399600--Sobic003G140700 Sobic006G172500 Sobic006G172500 Sobic003G399600--Sobic006G172500 Sobic001G304201 Sobic001G304201 Sobic003G399600--Sobic001G304201 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic003G399600--Sobic006G150100 Sobic002G085900--Sobic006G225500 Sobic002G085900--Sobic006G172500 Sobic002G085900--Sobic003G399600 Sobic006G172550 Sobic006G172550 Sobic002G085900--Sobic006G172550 Sobic002G085900--Sobic002G329200 Sobic007G090460 Sobic007G090460 Sobic002G085900--Sobic007G090460 Sobic006G235200 Sobic006G235200 Sobic002G085900--Sobic006G235200 Sobic003G121100 Sobic003G121100 Sobic002G085900--Sobic003G121100 Sobic002G183700 Sobic002G183700 Sobic002G085900--Sobic002G183700 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic006G225500--Sobic002G255000 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic006G225500--Sobic002G183700 Sobic003G064800 Sobic003G064800 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.