Gene annotation
Transcriptome id Sobic.003G399600.1
Synonym DIR1
Functional annotation LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XG57
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48490 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os01g68580.1 : LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
3 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.003G140700 peroxidase precursor, putative, expressed -
5 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
6 Sobic.001G304201 - -
7 Sobic.004G110700 DNA binding protein, putative, expressed -
8 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
10 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
11 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
12 Sobic.006G274933 - -
13 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.007G090469 - -
15 Sobic.002G085900 expressed protein -
16 Sobic.001G395800 SMP-30/Gluconolaconase/LRE domain protein, putative, expressed -
17 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
18 Sobic.010G212500 - -
19 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
20 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G399600 Sobic003G399600 Sobic006G225500 Sobic006G225500 Sobic003G399600--Sobic006G225500 Sobic003G269600 Sobic003G269600 Sobic003G399600--Sobic003G269600 Sobic002G326500 Sobic002G326500 Sobic003G399600--Sobic002G326500 Sobic003G140700 Sobic003G140700 Sobic003G399600--Sobic003G140700 Sobic006G172500 Sobic006G172500 Sobic003G399600--Sobic006G172500 Sobic001G304201 Sobic001G304201 Sobic003G399600--Sobic001G304201 Sobic004G110700 Sobic004G110700 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic006G150100 Sobic006G150100 Sobic003G399600--Sobic006G150100 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic005G127400 Sobic005G127400 Sobic006G225500--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic006G225500--Sobic002G255000 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic003G064800 Sobic003G064800 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic003G269600--Sobic004G110700 Sobic003G269600--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G269600--Sobic006G274933 Sobic003G269600--Sobic006G150100 Sobic003G269600--Sobic002G183700 Sobic010G106500 Sobic010G106500 Sobic003G269600--Sobic010G106500 Sobic003G121100 Sobic003G121100 Sobic003G269600--Sobic003G121100 Sobic003G269600--Sobic003G140700 Sobic006G170600 Sobic006G170600 Sobic003G269600--Sobic006G170600 Sobic002G326500--Sobic003G399600 Sobic008G016000 Sobic008G016000 Sobic002G326500--Sobic008G016000 Sobic002G326500--Sobic001G304201 Sobic002G003800 Sobic002G003800 Sobic002G326500--Sobic002G003800 Sobic002G185800 Sobic002G185800 Sobic002G326500--Sobic002G185800 Sobic002G326500--Sobic006G172500 Sobic002G326500--Sobic003G140700 Sobic009G035300 Sobic009G035300 Sobic002G326500--Sobic009G035300 Sobic005G080400 Sobic005G080400 Sobic002G326500--Sobic005G080400 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic006G172550 Sobic006G172550 Sobic006G172500--Sobic006G172550 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G172500--Sobic006G225500 Sobic010G088800 Sobic010G088800 Sobic006G172500--Sobic010G088800 Sobic006G172500--Sobic001G304201 Sobic006G172500--Sobic002G326500 Sobic002G250000 Sobic002G250000 Sobic006G172500--Sobic002G250000 Sobic007G090460 Sobic007G090460 Sobic006G172500--Sobic007G090460 Sobic001G302600 Sobic001G302600 Sobic001G304201--Sobic001G302600 Sobic004G042000 Sobic004G042000 Sobic001G304201--Sobic004G042000 Sobic001G304201--Sobic002G003800 Sobic002G213600 Sobic002G213600 Sobic001G304201--Sobic002G213600 Sobic001G304201--Sobic002G326500 Sobic001G304201--Sobic003G399600 Sobic003G311800 Sobic003G311800 Sobic001G304201--Sobic003G311800 Sobic001G304201--Sobic009G035300 Sobic006G197100 Sobic006G197100 Sobic001G304201--Sobic006G197100 Sobic006G028500 Sobic006G028500 Sobic004G110700--Sobic006G028500 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic006G019700 Sobic006G019700 Sobic004G110700--Sobic006G019700 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic010G234500 Sobic010G234500 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic009G186500--Sobic001G238200 Sobic003G349400 Sobic003G349400 Sobic009G186500--Sobic003G349400 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500
Octagon: transcription factors


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