Gene annotation
Transcriptome id Sobic.006G150100.1
Synonym Sb06g022840, PIP2;5, PIP2, PIP2B, SbPIP2;5;plasma membrane intrinsic protein/aquaporin, 2, PIP aquaporin
Functional annotation Down-regulated by silicon application (PubMedID : 24879770)
Up-regulated by osmotic stress. (PubMedID : 24879770)
aquaporin protein, putative, expressed
UniProt C5YCE6
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF137
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G37170 : plasma membrane intrinsic protein 2
RAP-DB (Rice) LOC_Os02g41860.2 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a045837 , Zm00025a021083 , Zm00025a032042 , Zm00025a049307 , Zm00025a032750 , Zm00025a010642 , Zm00025a013555 , Zm00025a013554
Brachypodium KQJ83644 , KQK00428 , KQK16443 , KQK16441
Barley HORVU2Hr1G089820.11 , HORVU2Hr1G089820.10 , HORVU2Hr1G089820.5 , HORVU2Hr1G089820.4 , HORVU2Hr1G089820.7 , HORVU2Hr1G089820.6 , HORVU2Hr1G089820.1 , HORVU2Hr1G089820.3 , HORVU2Hr1G089820.2 , HORVU2Hr1G089820.9 , HORVU2Hr1G089820.8 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.5 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.7 , HORVU6Hr1G058930.6 , HORVU6Hr1G058930.1 , HORVU6Hr1G058930.3 , HORVU6Hr1G058930.2 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU2Hr1G089940.21 , HORVU2Hr1G089940.20 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.13 , HORVU2Hr1G038740.10 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.16 , HORVU2Hr1G038740.17 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15 , HORVU2Hr1G038740.18 , HORVU5Hr1G084230.1 , HORVU5Hr1G084230.2 , HORVU5Hr1G084230.4 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.1 , HORVU2Hr1G089940.8 , HORVU2Hr1G089970.2 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU2Hr1G038740.2 , HORVU2Hr1G038740.3 , HORVU2Hr1G038740.5 , HORVU2Hr1G038740.7 , HORVU2Hr1G089940.9
Wheat TraesCS2D02G376100 , TraesCS2A02G198500 , TraesCS6B02G259000 , TraesCS4A02G286200 , TraesCS5B02G332500 , TraesCS2D02G206300 , TraesCS7A02G191200 , TraesCS4B02G027600 , TraesCS6D02G212900 , TraesCS7D02G192200 , TraesCS5D02G112500 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS5D02G338200 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS5A02G332300 , TraesCS6A02G222100 , TraesCS2B02G396800 , TraesCS2B02G225900 , TraesCS2B02G077700 , TraesCS2A02G065700 , TraesCS7B02G096000 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G349400 expressed protein -
2 Sobic.005G127400 expressed protein -
3 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.004G110700 DNA binding protein, putative, expressed -
5 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.002G068000 expressed protein -
7 Sobic.010G234500 O-methyltransferase, putative, expressed -
8 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G140700 peroxidase precursor, putative, expressed -
11 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
12 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
13 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G064800 dirigent, putative, expressed -
15 Sobic.001G237800 expansin precursor, putative, expressed -
16 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
17 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
18 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.002G255000 AIR12, putative, expressed -
20 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G150100 Sobic006G150100 Sobic003G349400 Sobic003G349400 Sobic006G150100--Sobic003G349400 Sobic005G127400 Sobic005G127400 Sobic006G150100--Sobic005G127400 Sobic002G003700 Sobic002G003700 Sobic006G150100--Sobic002G003700 Sobic004G110700 Sobic004G110700 Sobic006G150100--Sobic004G110700 Sobic006G170600 Sobic006G170600 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G225500 Sobic006G225500 Sobic006G150100--Sobic006G225500 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic002G255000 Sobic002G255000 Sobic003G349400--Sobic002G255000 Sobic003G064800 Sobic003G064800 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic003G140700 Sobic003G140700 Sobic005G127400--Sobic003G140700 Sobic009G186500 Sobic009G186500 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic002G003700--Sobic006G150100 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic004G110700--Sobic002G003700 Sobic004G322100 Sobic004G322100 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic004G110700--Sobic001G229000 Sobic006G019700 Sobic006G019700 Sobic004G110700--Sobic006G019700 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G202600 Sobic006G202600 Sobic006G170600--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic006G170600--Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic006G170600--Sobic004G180700 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic009G032900 Sobic009G032900 Sobic002G068000--Sobic009G032900 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic002G068000--Sobic010G234500 Sobic005G080600 Sobic005G080600 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic005G216700 Sobic005G216700 Sobic002G068000--Sobic005G216700 Sobic002G068000--Sobic010G066800 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic010G234500--Sobic001G238200 Sobic010G234500--Sobic009G186500 Sobic010G234500--Sobic002G068000 Sobic004G306900 Sobic004G306900 Sobic010G234500--Sobic004G306900 Sobic010G234500--Sobic006G019700 Sobic010G158400--Sobic002G068000 Sobic010G158400--Sobic009G032900 Sobic010G158400--Sobic003G426500 Sobic010G158400--Sobic003G349400 Sobic004G351200 Sobic004G351200 Sobic010G158400--Sobic004G351200 Sobic003G185300 Sobic003G185300 Sobic010G158400--Sobic003G185300 Sobic010G158400--Sobic005G216700 Sobic010G158400--Sobic009G259800 Sobic010G158400--Sobic006G150100 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600
Octagon: transcription factors


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