Gene annotation
Transcriptome id Sobic.009G035900.1
Synonym Sb09g003040
Functional annotation CHIT10 - Chitinase family protein precursor, expressed
UniProt C5YZL4
Pfam PF00182
Panther DB PTHR22595 PTHR22595:SF35
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology -
Gene Ontology GO:0016998; cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT1G02360 : Chitinase family protein
RAP-DB (Rice) LOC_Os01g18400.1 : CHIT10 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a041699 , Zm00025a038131
Brachypodium -
Barley HORVU1Hr1G017670.1 , HORVU7Hr1G121850.1 , HORVU7Hr1G121850.2 , HORVU7Hr1G121850.3 , HORVU7Hr1G121850.4 , HORVU7Hr1G121850.5 , HORVU1Hr1G062030.1
Wheat TraesCS3A02G312500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G237800 expansin precursor, putative, expressed -
2 Sobic.005G127400 expressed protein -
3 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.003G349400 expressed protein -
5 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
6 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.008G121900 expressed protein -
8 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
10 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.001G318300 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.003G140700 peroxidase precursor, putative, expressed -
13 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.004G110700 DNA binding protein, putative, expressed -
15 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
16 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
17 Sobic.002G255000 AIR12, putative, expressed -
18 Sobic.003G064800 dirigent, putative, expressed -
19 Sobic.010G234500 O-methyltransferase, putative, expressed -
20 Sobic.009G219200 expressed protein -


Gene co-expression network
sample Sobic009G035900 Sobic009G035900 Sobic001G237800 Sobic001G237800 Sobic009G035900--Sobic001G237800 Sobic005G127400 Sobic005G127400 Sobic009G035900--Sobic005G127400 Sobic006G150100 Sobic006G150100 Sobic009G035900--Sobic006G150100 Sobic003G349400 Sobic003G349400 Sobic009G035900--Sobic003G349400 Sobic003G132400 Sobic003G132400 Sobic009G035900--Sobic003G132400 Sobic006G170600 Sobic006G170600 Sobic009G035900--Sobic006G170600 Sobic008G121900 Sobic008G121900 Sobic009G035900--Sobic008G121900 Sobic002G003700 Sobic002G003700 Sobic009G035900--Sobic002G003700 Sobic010G162800 Sobic010G162800 Sobic009G035900--Sobic010G162800 Sobic009G219200 Sobic009G219200 Sobic001G237800--Sobic009G219200 Sobic001G237800--Sobic010G162800 Sobic003G140700 Sobic003G140700 Sobic001G237800--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G237800--Sobic002G255000 Sobic001G237800--Sobic005G127400 Sobic001G238000 Sobic001G238000 Sobic001G237800--Sobic001G238000 Sobic003G064800 Sobic003G064800 Sobic001G237800--Sobic003G064800 Sobic001G238200 Sobic001G238200 Sobic001G237800--Sobic001G238200 Sobic001G237800--Sobic009G035900 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic006G225500 Sobic006G225500 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic009G186500 Sobic009G186500 Sobic005G127400--Sobic009G186500 Sobic010G234500 Sobic010G234500 Sobic005G127400--Sobic010G234500 Sobic004G110700 Sobic004G110700 Sobic005G127400--Sobic004G110700 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic001G318300 Sobic001G318300 Sobic003G132400--Sobic001G318300 Sobic003G132400--Sobic002G003700 Sobic002G329200 Sobic002G329200 Sobic003G132400--Sobic002G329200 Sobic003G132400--Sobic006G150100 Sobic003G132400--Sobic005G127400 Sobic003G132400--Sobic009G035900 Sobic003G059000 Sobic003G059000 Sobic003G132400--Sobic003G059000 Sobic003G132400--Sobic003G349400 Sobic003G132400--Sobic006G170600 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G202600 Sobic006G202600 Sobic006G170600--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic006G170600--Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic006G170600--Sobic004G180700 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic006G170600--Sobic002G329200 Sobic006G170600--Sobic001G237800 Sobic008G121900--Sobic009G035900 Sobic003G140600 Sobic003G140600 Sobic008G121900--Sobic003G140600 Sobic006G172601 Sobic006G172601 Sobic008G121900--Sobic006G172601 Sobic007G021700 Sobic007G021700 Sobic008G121900--Sobic007G021700 Sobic008G121900--Sobic003G132400 Sobic010G088800 Sobic010G088800 Sobic008G121900--Sobic010G088800 Sobic003G228600 Sobic003G228600 Sobic008G121900--Sobic003G228600 Sobic006G103300 Sobic006G103300 Sobic008G121900--Sobic006G103300 Sobic001G508532 Sobic001G508532 Sobic008G121900--Sobic001G508532 Sobic002G003700--Sobic006G150100 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic010G162800--Sobic001G237800 Sobic010G162800--Sobic001G238000 Sobic010G162800--Sobic003G064800 Sobic010G162800--Sobic001G238200 Sobic010G162800--Sobic010G234500 Sobic010G162800--Sobic009G219200 Sobic010G162800--Sobic005G127400 Sobic010G162800--Sobic003G349400 Sobic004G306900 Sobic004G306900 Sobic010G162800--Sobic004G306900
Octagon: transcription factors


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