Gene annotation
Transcriptome id Sobic.006G225500.1
Synonym Sb06g029450
Functional annotation plastocyanin-like domain containing protein, putative, expressed
UniProt C5YGK4
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT1G22480 : Cupredoxin superfamily protein
RAP-DB (Rice) LOC_Os04g53710.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.003G140700 peroxidase precursor, putative, expressed -
3 Sobic.005G127400 expressed protein -
4 Sobic.002G255000 AIR12, putative, expressed -
5 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
7 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
8 Sobic.003G064800 dirigent, putative, expressed -
9 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
10 Sobic.006G103300 wound/stress protein, putative, expressed -
11 Sobic.001G238200 expansin precursor, putative, expressed -
12 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
13 Sobic.001G237800 expansin precursor, putative, expressed -
14 Sobic.003G349400 expressed protein -
15 Sobic.004G110700 DNA binding protein, putative, expressed -
16 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
17 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.009G219200 expressed protein -
20 Sobic.001G438200 expressed protein -


Gene co-expression network
sample Sobic006G225500 Sobic006G225500 Sobic009G186500 Sobic009G186500 Sobic006G225500--Sobic009G186500 Sobic003G140700 Sobic003G140700 Sobic006G225500--Sobic003G140700 Sobic005G127400 Sobic005G127400 Sobic006G225500--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic003G064800 Sobic003G064800 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic010G234500 Sobic010G234500 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic001G238200 Sobic001G238200 Sobic009G186500--Sobic001G238200 Sobic003G349400 Sobic003G349400 Sobic009G186500--Sobic003G349400 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic002G255000--Sobic003G064800 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic003G399600--Sobic006G225500 Sobic003G269600 Sobic003G269600 Sobic003G399600--Sobic003G269600 Sobic002G326500 Sobic002G326500 Sobic003G399600--Sobic002G326500 Sobic003G399600--Sobic003G140700 Sobic006G172500 Sobic006G172500 Sobic003G399600--Sobic006G172500 Sobic001G304201 Sobic001G304201 Sobic003G399600--Sobic001G304201 Sobic003G399600--Sobic004G110700 Sobic003G399600--Sobic009G186500 Sobic003G399600--Sobic006G150100 Sobic006G273300--Sobic002G255000 Sobic006G273300--Sobic001G438200 Sobic006G273300--Sobic007G008600 Sobic006G273300--Sobic003G140700 Sobic006G273300--Sobic003G064800 Sobic006G273300--Sobic006G225500 Sobic006G273300--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic006G273300--Sobic004G029100 Sobic006G273300--Sobic002G183700 Sobic007G158800 Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic004G306900 Sobic004G306900 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic007G008600--Sobic002G255000 Sobic007G008600--Sobic007G100700 Sobic007G008600--Sobic003G064800 Sobic007G008600--Sobic006G273300 Sobic007G008600--Sobic006G106900 Sobic007G008600--Sobic005G127400 Sobic007G008600--Sobic004G029100 Sobic003G182200 Sobic003G182200 Sobic007G008600--Sobic003G182200 Sobic007G008600--Sobic006G225500
Octagon: transcription factors


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