Gene annotation
| Transcriptome id | Sobic.003G121100.1 |
|---|---|
| Synonym | Sb03g010250 |
| Functional annotation | peroxidase precursor, putative, expressed |
| UniProt | C5XGH3 |
| Pfam | PF00141 |
| Panther DB | PTHR31388 PTHR31388:SF3 |
| NCBI CDD | - |
| KEGG Orthology | K00430; peroxidase |
| Gene Ontology | GO:0006979; response to oxidative stress GO:0004601peroxidase activity |
Orthologs (automatic annotation)
| TAIR | AT5G66390 : Peroxidase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g15830.1 : peroxidase precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a035284 , Zm00025a024039 |
| Brachypodium | KQK03766 , KQK03765 |
| Barley | HORVU3Hr1G036790.1 , HORVU3Hr1G036790.2 , HORVU3Hr1G036790.3 , HORVU3Hr1G036880.9 , HORVU3Hr1G036880.4 , HORVU3Hr1G036880.5 , HORVU3Hr1G036880.6 , HORVU3Hr1G036880.7 , HORVU3Hr1G036880.1 , HORVU3Hr1G036880.3 , HORVU3Hr1G036860.4 , HORVU3Hr1G036860.5 , HORVU3Hr1G036860.2 , HORVU3Hr1G036860.3 , HORVU3Hr1G036860.1 , HORVU3Hr1G036820.2 , HORVU3Hr1G036820.1 , HORVU6Hr1G075510.2 , HORVU6Hr1G075510.1 |
| Wheat | TraesCS6A02G305600 , TraesCS3A02G180100 , TraesCS6B02G333800 , TraesCS3A02G180300 , TraesCS3A02G180200 , TraesCS3D02G185000 , TraesCS3B02G210000 , TraesCS3D02G184900 , TraesCS3D02G185100 , TraesCS3D02G185200 , TraesCS3B02G209700 , TraesCS6D02G284700 , TraesCS3A02G180000 , TraesCS3A02G180000 , TraesCS3B02G209800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G183700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed | - |
| 2 | Sobic.004G110700 | DNA binding protein, putative, expressed | - |
| 3 | Sobic.006G225500 | plastocyanin-like domain containing protein, putative, expressed | - |
| 4 | Sobic.003G140700 | peroxidase precursor, putative, expressed | - |
| 5 | Sobic.003G269600 | "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
| 6 | Sobic.003G311800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed | - |
| 7 | Sobic.006G170600 | tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed | K09873: aquaporin TIP |
| 8 | Sobic.003G399600 | LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 9 | Sobic.006G274933 | - | - |
| 10 | Sobic.004G297900 | plastocyanin-like domain containing protein, putative, expressed | - |
| 11 | Sobic.005G127400 | expressed protein | - |
| 12 | Sobic.002G154600 | fasciclin-like arabinogalactan protein 8 precursor, putative, expressed | - |
| 13 | Sobic.001G062500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed | K11817: indole-3-acetaldehyde oxidase |
| 14 | Sobic.006G273300 | "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed | - |
| 15 | Sobic.006G202600 | Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed | K17893: AOX1, ubiquinol oxidase |
| 16 | Sobic.001G229000 | xyloglucan galactosyltransferase KATAMARI1, putative, expressed | - |
| 17 | Sobic.007G090469 | - | - |
| 18 | Sobic.004G322100 | hypro1, putative, expressed | - |
| 19 | Sobic.002G003700 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 20 | Sobic.007G158800 | patatin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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