Gene annotation
Transcriptome id Sobic.006G202600.1
Synonym AOX1B, Sb06g027420
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
immutans protein, putative, expressed
UniProt C5YF56
Pfam PF01786
Panther DB PTHR31803:SF8 PTHR31803
NCBI CDD -
KEGG Orthology K17893; AOX1, ubiquinol oxidase
Gene Ontology GO:0009916; alternative oxidase activity


Orthologs (automatic annotation)
TAIR AT3G22360 : alternative oxidase 1B
RAP-DB (Rice) LOC_Os04g51160.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a009949 , Zm00025a009948 , Zm00025a009947 , Zm00025a021669
Brachypodium PNT69270 , KQJ84390 , KQJ84391 , KQJ84389 , KQK00893
Barley HORVU6Hr1G068150.4 , HORVU6Hr1G068150.5 , HORVU6Hr1G068150.6 , HORVU0Hr1G005420.3 , HORVU6Hr1G068150.2 , HORVU6Hr1G068150.3 , HORVU2Hr1G101920.2 , HORVU2Hr1G101920.1 , HORVU2Hr1G101990.2 , HORVU2Hr1G101990.1 , HORVU0Hr1G005420.4 , HORVU6Hr1G068150.1
Wheat TraesCS6D02G245800 , TraesCS2B02G459300 , TraesCS2D02G436700 , TraesCS6A02G269100 , TraesCS2A02G439400 , TraesCS6B02G296400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G180700 expressed protein -
2 Sobic.010G196000 DNA binding protein, putative, expressed -
3 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
4 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
5 Sobic.004G301600 integral membrane protein, putative, expressed -
6 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G050800 expressed protein -
8 Sobic.001G508532 - -
9 Sobic.007G090469 - -
10 Sobic.002G105300 SCP-like extracellular protein, expressed -
11 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.002G124500 expansin precursor, putative, expressed -
13 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.001G393000 expressed protein -
16 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
18 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
20 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G202600 Sobic006G202600 Sobic004G180700 Sobic004G180700 Sobic006G202600--Sobic004G180700 Sobic010G196000 Sobic010G196000 Sobic006G202600--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic006G202600--Sobic004G295100 Sobic006G170600 Sobic006G170600 Sobic006G202600--Sobic006G170600 Sobic004G301600 Sobic004G301600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G050800 Sobic006G050800 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic004G180700--Sobic004G301600 Sobic002G105300 Sobic002G105300 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic002G301900 Sobic002G301900 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic010G196000--Sobic002G105300 Sobic001G330300 Sobic001G330300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic004G295100--Sobic010G196000 Sobic004G297900 Sobic004G297900 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic006G150100 Sobic006G150100 Sobic006G170600--Sobic006G150100 Sobic002G003700 Sobic002G003700 Sobic006G170600--Sobic002G003700 Sobic006G170600--Sobic006G202600 Sobic006G170600--Sobic004G301600 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 Sobic001G238300 Sobic001G238300 SobicK026900--Sobic001G238300 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 Sobic010G270700 Sobic010G270700 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic001G508532--Sobic006G202600 Sobic002G124500 Sobic002G124500 Sobic001G508532--Sobic002G124500 Sobic004G318700 Sobic004G318700 Sobic001G508532--Sobic004G318700 Sobic001G508532--Sobic010G196000 Sobic001G508532--Sobic004G295100 Sobic001G508532--Sobic005G067500 Sobic010G106500 Sobic010G106500 Sobic001G508532--Sobic010G106500 Sobic001G264000 Sobic001G264000 Sobic001G508532--Sobic001G264000 Sobic001G508532--Sobic006G170600 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500
Octagon: transcription factors


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