Gene annotation
Transcriptome id Sobic.005G163800.1
Synonym TT10, LAC15, Sb05g022480, ATLAC15
Functional annotation laccase precursor protein, putative, expressed
UniProt A0A1B6PT00
Pfam PF00394 PF07732 PF07731
Panther DB PTHR11709 PTHR11709:SF118
NCBI CDD -
KEGG Orthology K05909; laccase
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT5G09360 : laccase 14
RAP-DB (Rice) LOC_Os11g47390.1 : laccase precursor protein, putative, expressed
MaizeGDB (Corn) Zm00025a022105 , Zm00025a029611 , Zm00025a033185 , Zm00025a039744 , Zm00025a026840 , Zm00025a002044 , Zm00025a027016
Brachypodium KQK10592 , PNT73207 , KQK10391 , KQK01912
Barley HORVU5Hr1G047480.10 , HORVU7Hr1G083090.3 , HORVU7Hr1G083090.1 , HORVU7Hr1G083090.2 , HORVU7Hr1G083090.4 , HORVU7Hr1G083090.5 , HORVU5Hr1G047480.6 , HORVU5Hr1G047480.7 , HORVU5Hr1G047480.3 , HORVU5Hr1G047480.9
Wheat TraesCS5D02G156500 , TraesCS7B02G248800 , TraesCS1B02G394300 , TraesCS6D02G284100 , TraesCS5A02G151400 , TraesCS7A02G337400 , TraesCS7D02G345000 , TraesCS6A02G304900 , TraesCS7B02G079800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
2 Sobic.004G180700 expressed protein -
3 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G090900 cytochrome P450, putative, expressed -
5 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
6 Sobic.004G301600 integral membrane protein, putative, expressed -
7 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
8 Sobic.010G146300 DEFL9 - Defensin and Defensin-like DEFL family, expressed K08235: xyloglucan:xyloglucosyl transferase
9 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
10 Sobic.006G050800 expressed protein -
11 Sobic.002G105300 SCP-like extracellular protein, expressed -
12 Sobic.008G158400 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
13 Sobic.010G196000 DNA binding protein, putative, expressed -
14 Sobic.002G124500 expansin precursor, putative, expressed -
15 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
16 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
18 Sobic.010G074800 expressed protein -
19 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G163800 Sobic005G163800 Sobic002G412600 Sobic002G412600 Sobic005G163800--Sobic002G412600 Sobic004G180700 Sobic004G180700 Sobic005G163800--Sobic004G180700 Sobic001G293000 Sobic001G293000 Sobic005G163800--Sobic001G293000 Sobic002G090900 Sobic002G090900 Sobic005G163800--Sobic002G090900 Sobic006G202600 Sobic006G202600 Sobic005G163800--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic005G163800--Sobic004G301600 Sobic006G170600 Sobic006G170600 Sobic005G163800--Sobic006G170600 Sobic010G146300 Sobic010G146300 Sobic005G163800--Sobic010G146300 Sobic002G122400 Sobic002G122400 Sobic005G163800--Sobic002G122400 Sobic002G412600--Sobic002G122400 Sobic002G412600--Sobic010G146300 Sobic002G412600--Sobic001G293000 Sobic010G006200 Sobic010G006200 Sobic002G412600--Sobic010G006200 Sobic002G412600--Sobic005G163800 Sobic002G412600--Sobic006G170600 Sobic002G003700 Sobic002G003700 Sobic002G412600--Sobic002G003700 Sobic002G329200 Sobic002G329200 Sobic002G412600--Sobic002G329200 Sobic004G106000 Sobic004G106000 Sobic002G412600--Sobic004G106000 Sobic004G180700--Sobic004G301600 Sobic002G105300 Sobic002G105300 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic006G050800 Sobic006G050800 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic010G196000 Sobic010G196000 Sobic004G180700--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic004G180700--Sobic004G295100 Sobic002G301900 Sobic002G301900 Sobic004G180700--Sobic002G301900 Sobic004G180700--Sobic005G163800 Sobic001G293000--Sobic002G412600 Sobic001G293000--Sobic010G146300 Sobic001G293000--Sobic010G006200 Sobic001G293000--Sobic002G122400 Sobic001G293000--Sobic005G163800 Sobic001G293000--Sobic004G106000 Sobic001G293000--Sobic006G170600 Sobic001G293000--Sobic006G202600 Sobic001G293000--Sobic002G329200 Sobic002G090900--Sobic005G163800 Sobic006G079300 Sobic006G079300 Sobic002G090900--Sobic006G079300 Sobic002G124500 Sobic002G124500 Sobic002G090900--Sobic002G124500 Sobic006G078900 Sobic006G078900 Sobic002G090900--Sobic006G078900 Sobic002G090900--Sobic006G170600 Sobic001G242100 Sobic001G242100 Sobic002G090900--Sobic001G242100 Sobic007G085500 Sobic007G085500 Sobic002G090900--Sobic007G085500 Sobic001G237800 Sobic001G237800 Sobic002G090900--Sobic001G237800 Sobic002G090900--Sobic002G412600 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic006G202600--Sobic004G295100 Sobic006G202600--Sobic006G170600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100 Sobic006G150100 Sobic006G150100 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G170600--Sobic006G202600 Sobic006G170600--Sobic004G301600 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic006G170600--Sobic002G329200 Sobic006G170600--Sobic001G237800 Sobic010G146300--Sobic002G412600 Sobic010G146300--Sobic001G293000 Sobic010G146300--Sobic010G006200 Sobic010G146300--Sobic002G122400 Sobic010G146300--Sobic004G106000 Sobic010G146300--Sobic005G163800 Sobic002G307900 Sobic002G307900 Sobic010G146300--Sobic002G307900 Sobic010G146300--Sobic007G085500 Sobic001G314100 Sobic001G314100 Sobic010G146300--Sobic001G314100 Sobic002G122400--Sobic002G412600 Sobic002G122400--Sobic010G006200 Sobic002G122400--Sobic002G003700 Sobic002G122400--Sobic010G146300 Sobic002G122400--Sobic006G150100 Sobic002G122400--Sobic006G170600 Sobic010G139100 Sobic010G139100 Sobic002G122400--Sobic010G139100 Sobic002G122400--Sobic001G293000 Sobic002G122400--Sobic002G307900
Octagon: transcription factors


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