Gene annotation
Transcriptome id Sobic.002G412600.1
Synonym Sb02g042530, RALFL33
Functional annotation RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5X4Y5
Pfam PF05498
Panther DB PTHR33136 PTHR33136:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G15800 : ralf-like 33
RAP-DB (Rice) LOC_Os01g15320.1 : RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) Zm00025a049122 , Zm00025a039204
Brachypodium PNT73526
Barley HORVU2Hr1G019770.1 , HORVU1Hr1G080640.1 , HORVU1Hr1G080640.2 , HORVU3Hr1G097790.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
2 Sobic.010G146300 DEFL9 - Defensin and Defensin-like DEFL family, expressed K08235: xyloglucan:xyloglucosyl transferase
3 Sobic.001G293000 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.010G006200 expansin precursor, putative, expressed -
5 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.004G106000 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
11 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
12 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
13 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
14 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.001G393000 expressed protein -
16 Sobic.001G314600 expansin precursor, putative, expressed -
17 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
19 Sobic.004G301600 integral membrane protein, putative, expressed -
20 Sobic.004G180700 expressed protein -


Gene co-expression network
sample Sobic002G412600 Sobic002G412600 Sobic002G122400 Sobic002G122400 Sobic002G412600--Sobic002G122400 Sobic010G146300 Sobic010G146300 Sobic002G412600--Sobic010G146300 Sobic001G293000 Sobic001G293000 Sobic002G412600--Sobic001G293000 Sobic010G006200 Sobic010G006200 Sobic002G412600--Sobic010G006200 Sobic005G163800 Sobic005G163800 Sobic002G412600--Sobic005G163800 Sobic006G170600 Sobic006G170600 Sobic002G412600--Sobic006G170600 Sobic002G003700 Sobic002G003700 Sobic002G412600--Sobic002G003700 Sobic002G329200 Sobic002G329200 Sobic002G412600--Sobic002G329200 Sobic004G106000 Sobic004G106000 Sobic002G412600--Sobic004G106000 Sobic002G122400--Sobic002G412600 Sobic002G122400--Sobic010G006200 Sobic002G122400--Sobic002G003700 Sobic002G122400--Sobic010G146300 Sobic006G150100 Sobic006G150100 Sobic002G122400--Sobic006G150100 Sobic002G122400--Sobic006G170600 Sobic010G139100 Sobic010G139100 Sobic002G122400--Sobic010G139100 Sobic002G122400--Sobic001G293000 Sobic002G307900 Sobic002G307900 Sobic002G122400--Sobic002G307900 Sobic010G146300--Sobic002G412600 Sobic010G146300--Sobic001G293000 Sobic010G146300--Sobic010G006200 Sobic010G146300--Sobic002G122400 Sobic010G146300--Sobic004G106000 Sobic010G146300--Sobic005G163800 Sobic010G146300--Sobic002G307900 Sobic007G085500 Sobic007G085500 Sobic010G146300--Sobic007G085500 Sobic001G314100 Sobic001G314100 Sobic010G146300--Sobic001G314100 Sobic001G293000--Sobic002G412600 Sobic001G293000--Sobic010G146300 Sobic001G293000--Sobic010G006200 Sobic001G293000--Sobic002G122400 Sobic001G293000--Sobic005G163800 Sobic001G293000--Sobic004G106000 Sobic001G293000--Sobic006G170600 Sobic006G202600 Sobic006G202600 Sobic001G293000--Sobic006G202600 Sobic001G293000--Sobic002G329200 Sobic010G006200--Sobic010G146300 Sobic010G006200--Sobic002G412600 Sobic010G006200--Sobic002G122400 Sobic001G338900 Sobic001G338900 Sobic010G006200--Sobic001G338900 Sobic010G006200--Sobic001G314100 Sobic010G006200--Sobic001G293000 Sobic010G006200--Sobic004G106000 Sobic001G314600 Sobic001G314600 Sobic010G006200--Sobic001G314600 Sobic010G006200--Sobic002G307900 Sobic005G163800--Sobic002G412600 Sobic004G180700 Sobic004G180700 Sobic005G163800--Sobic004G180700 Sobic005G163800--Sobic001G293000 Sobic002G090900 Sobic002G090900 Sobic005G163800--Sobic002G090900 Sobic005G163800--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic005G163800--Sobic004G301600 Sobic005G163800--Sobic006G170600 Sobic005G163800--Sobic010G146300 Sobic005G163800--Sobic002G122400 Sobic006G170600--Sobic006G150100 Sobic006G170600--Sobic002G003700 Sobic006G170600--Sobic006G202600 Sobic006G170600--Sobic004G301600 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic002G003700--Sobic006G150100 Sobic004G110700 Sobic004G110700 Sobic002G003700--Sobic004G110700 Sobic005G127400 Sobic005G127400 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic003G349400 Sobic003G349400 Sobic002G003700--Sobic003G349400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic001G318300 Sobic001G318300 Sobic002G329200--Sobic001G318300 Sobic002G329200--Sobic003G132400 Sobic002G329200--Sobic006G170600 Sobic002G329200--Sobic006G150100 Sobic003G059000 Sobic003G059000 Sobic002G329200--Sobic003G059000 Sobic002G329200--Sobic002G003700 Sobic003G399600 Sobic003G399600 Sobic002G329200--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic002G329200--Sobic002G085900 Sobic002G329200--Sobic006G225500 Sobic004G106000--Sobic010G146300 Sobic004G106000--Sobic010G006200 Sobic004G106000--Sobic001G293000 Sobic004G106000--Sobic002G412600 Sobic004G106000--Sobic002G122400 Sobic010G074800 Sobic010G074800 Sobic004G106000--Sobic010G074800 Sobic004G106000--Sobic001G338900 Sobic004G106000--Sobic001G314100 Sobic008G158266 Sobic008G158266 Sobic004G106000--Sobic008G158266
Octagon: transcription factors


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