Gene annotation
Transcriptome id Sobic.001G314600.1
Synonym EXPA7, ATEXP7, Sb01g030590, ATEXPA7, EXP7, ATHEXPALPHA1.26
Functional annotation expansin precursor, putative, expressed
UniProt C5WUE9
Pfam PF01357 PF03330
Panther DB PTHR31867 PTHR31867:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12560 : expansin A7
RAP-DB (Rice) LOC_Os10g39110.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023908 , Zm00025a052244 , Zm00025a006817 , Zm00025a050298 , Zm00025a055602
Brachypodium KQJ99400 , KQJ96854 , KQJ96855 , KQJ97590 , KQK21504
Barley HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU1Hr1G051620.1 , HORVU1Hr1G051620.3 , HORVU1Hr1G051620.2 , HORVU1Hr1G051590.2 , HORVU1Hr1G051590.1 , HORVU1Hr1G051640.1 , HORVU4Hr1G072400.1
Wheat TraesCS4B02G271100 , TraesCS1B02G214200 , TraesCS1D02G203100 , TraesCS4D02G270200 , TraesCS1A02G199400 , TraesCS1A02G199300 , TraesCS1B02G214300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G059000 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
2 Sobic.010G006200 expansin precursor, putative, expressed -
3 Sobic.003G132400 OsSubt1 - Putative Subtilisin homologue, expressed -
4 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
5 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
7 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
8 Sobic.003G349400 expressed protein -
9 Sobic.007G019900 expansin precursor, putative, expressed -
10 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.001G308600 POEI31 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
12 Sobic.001G318300 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G338900 cytochrome P450, putative, expressed -
14 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
15 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
16 Sobic.001G301400 expansin precursor, putative, expressed -
17 Sobic.005G127400 expressed protein -
18 Sobic.001G542000 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G314100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.002G307900 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G314600 Sobic001G314600 Sobic003G059000 Sobic003G059000 Sobic001G314600--Sobic003G059000 Sobic010G006200 Sobic010G006200 Sobic001G314600--Sobic010G006200 Sobic003G132400 Sobic003G132400 Sobic001G314600--Sobic003G132400 Sobic002G122400 Sobic002G122400 Sobic001G314600--Sobic002G122400 Sobic002G003700 Sobic002G003700 Sobic001G314600--Sobic002G003700 Sobic006G150100 Sobic006G150100 Sobic001G314600--Sobic006G150100 Sobic009G035900 Sobic009G035900 Sobic001G314600--Sobic009G035900 Sobic003G349400 Sobic003G349400 Sobic001G314600--Sobic003G349400 Sobic007G019900 Sobic007G019900 Sobic001G314600--Sobic007G019900 Sobic003G059000--Sobic001G314600 Sobic001G318300 Sobic001G318300 Sobic003G059000--Sobic001G318300 Sobic002G329200 Sobic002G329200 Sobic003G059000--Sobic002G329200 Sobic003G059000--Sobic003G132400 Sobic001G308600 Sobic001G308600 Sobic003G059000--Sobic001G308600 Sobic003G059000--Sobic006G150100 Sobic007G021700 Sobic007G021700 Sobic003G059000--Sobic007G021700 Sobic001G542000 Sobic001G542000 Sobic003G059000--Sobic001G542000 Sobic003G059000--Sobic010G006200 Sobic010G146300 Sobic010G146300 Sobic010G006200--Sobic010G146300 Sobic002G412600 Sobic002G412600 Sobic010G006200--Sobic002G412600 Sobic010G006200--Sobic002G122400 Sobic001G338900 Sobic001G338900 Sobic010G006200--Sobic001G338900 Sobic001G314100 Sobic001G314100 Sobic010G006200--Sobic001G314100 Sobic001G293000 Sobic001G293000 Sobic010G006200--Sobic001G293000 Sobic004G106000 Sobic004G106000 Sobic010G006200--Sobic004G106000 Sobic010G006200--Sobic001G314600 Sobic002G307900 Sobic002G307900 Sobic010G006200--Sobic002G307900 Sobic003G132400--Sobic001G318300 Sobic003G132400--Sobic002G003700 Sobic003G132400--Sobic002G329200 Sobic003G132400--Sobic006G150100 Sobic005G127400 Sobic005G127400 Sobic003G132400--Sobic005G127400 Sobic003G132400--Sobic009G035900 Sobic003G132400--Sobic003G059000 Sobic003G132400--Sobic003G349400 Sobic006G170600 Sobic006G170600 Sobic003G132400--Sobic006G170600 Sobic002G122400--Sobic002G412600 Sobic002G122400--Sobic010G006200 Sobic002G122400--Sobic002G003700 Sobic002G122400--Sobic010G146300 Sobic002G122400--Sobic006G150100 Sobic002G122400--Sobic006G170600 Sobic010G139100 Sobic010G139100 Sobic002G122400--Sobic010G139100 Sobic002G122400--Sobic001G293000 Sobic002G122400--Sobic002G307900 Sobic002G003700--Sobic006G150100 Sobic004G110700 Sobic004G110700 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic006G150100--Sobic003G349400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G225500 Sobic006G225500 Sobic006G150100--Sobic006G225500 Sobic001G237800 Sobic001G237800 Sobic009G035900--Sobic001G237800 Sobic009G035900--Sobic005G127400 Sobic009G035900--Sobic006G150100 Sobic009G035900--Sobic003G349400 Sobic009G035900--Sobic003G132400 Sobic009G035900--Sobic006G170600 Sobic008G121900 Sobic008G121900 Sobic009G035900--Sobic008G121900 Sobic009G035900--Sobic002G003700 Sobic010G162800 Sobic010G162800 Sobic009G035900--Sobic010G162800 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic002G255000 Sobic002G255000 Sobic003G349400--Sobic002G255000 Sobic003G064800 Sobic003G064800 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic006G135500 Sobic006G135500 Sobic007G019900--Sobic006G135500 Sobic008G145900 Sobic008G145900 Sobic007G019900--Sobic008G145900 Sobic001G238100 Sobic001G238100 Sobic007G019900--Sobic001G238100 Sobic007G019900--Sobic010G139100 Sobic002G392100 Sobic002G392100 Sobic007G019900--Sobic002G392100 Sobic005G216700 Sobic005G216700 Sobic007G019900--Sobic005G216700 Sobic007G019900--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic007G019900--Sobic009G032900 Sobic002G334000 Sobic002G334000 Sobic007G019900--Sobic002G334000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.