Gene annotation
Transcriptome id Sobic.007G019900.1
Synonym ATEXPA11, ATEXP11, ATHEXPALPHA1.14, EXP11, EXPA11, Sb07g001720
Functional annotation expansin precursor, putative, expressed
UniProt C5YMD6
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g06050.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027043 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a040298 , Zm00025a040299 , Zm00025a040297 , Zm00025a006809 , Zm00025a055602 , Zm00025a040300
Brachypodium KQJ96857
Barley HORVU5Hr1G106500.5 , HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU4Hr1G072440.1 , HORVU4Hr1G072580.3 , HORVU7Hr1G092600.3 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU5Hr1G106500.6 , HORVU5Hr1G106500.4 , HORVU5Hr1G106500.2 , HORVU5Hr1G106500.1 , HORVU5Hr1G119860.1 , HORVU5Hr1G119860.2 , HORVU4Hr1G072400.1 , HORVU4Hr1G072580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU4Hr1G072580.1 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7
Wheat TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4D02G270500 , TraesCS5B02G528500 , TraesCS4B02G271100 , TraesCS4B02G271300 , TraesCS5A02G443400 , TraesCS4D02G271800 , TraesCS4B02G272700 , TraesCS4B02G272800 , TraesCS5D02G527700 , TraesCS1B02G156700 , TraesCS5B02G528400 , TraesCS4D02G271900 , TraesCS4A02G034300 , TraesCS5B02G448000 , TraesCS5D02G450900 , TraesCS1A02G406900 , TraesCS4D02G271700 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4A02G032600 , TraesCS4D02G270400 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS4A02G345000 , TraesCS3A02G165600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G135500 glyoxal oxidase-related, putative, expressed -
2 Sobic.008G145900 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.001G238100 expansin precursor, putative, expressed -
4 Sobic.010G139100 serine/threonine-protein kinase, putative, expressed -
5 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
7 Sobic.002G068000 expressed protein -
8 Sobic.009G032900 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
10 Sobic.003G349400 expressed protein -
11 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
12 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.005G127400 expressed protein -
14 Sobic.001G314600 expansin precursor, putative, expressed -
15 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
16 Sobic.004G351200 -(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
17 Sobic.003G046700 expressed protein -
18 Sobic.004G110200 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
20 Sobic.004G009300 expressed protein -


Gene co-expression network
sample Sobic007G019900 Sobic007G019900 Sobic006G135500 Sobic006G135500 Sobic007G019900--Sobic006G135500 Sobic008G145900 Sobic008G145900 Sobic007G019900--Sobic008G145900 Sobic001G238100 Sobic001G238100 Sobic007G019900--Sobic001G238100 Sobic010G139100 Sobic010G139100 Sobic007G019900--Sobic010G139100 Sobic002G392100 Sobic002G392100 Sobic007G019900--Sobic002G392100 Sobic005G216700 Sobic005G216700 Sobic007G019900--Sobic005G216700 Sobic002G068000 Sobic002G068000 Sobic007G019900--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic007G019900--Sobic009G032900 Sobic002G334000 Sobic002G334000 Sobic007G019900--Sobic002G334000 Sobic006G135500--Sobic001G238100 Sobic006G135500--Sobic007G019900 Sobic006G135500--Sobic010G139100 Sobic004G009300 Sobic004G009300 Sobic006G135500--Sobic004G009300 Sobic002G392300 Sobic002G392300 Sobic006G135500--Sobic002G392300 Sobic003G046700 Sobic003G046700 Sobic006G135500--Sobic003G046700 Sobic006G135500--Sobic002G334000 Sobic006G135500--Sobic009G032900 Sobic005G226200 Sobic005G226200 Sobic006G135500--Sobic005G226200 Sobic008G145900--Sobic007G019900 Sobic008G145900--Sobic002G068000 Sobic008G145900--Sobic009G032900 Sobic008G145900--Sobic001G238100 Sobic003G349400 Sobic003G349400 Sobic008G145900--Sobic003G349400 Sobic007G020200 Sobic007G020200 Sobic008G145900--Sobic007G020200 Sobic008G145900--Sobic010G139100 Sobic008G145900--Sobic006G135500 Sobic008G145900--Sobic005G216700 Sobic001G238100--Sobic002G334000 Sobic001G238100--Sobic003G046700 Sobic001G238100--Sobic006G135500 Sobic007G206800 Sobic007G206800 Sobic001G238100--Sobic007G206800 Sobic001G499900 Sobic001G499900 Sobic001G238100--Sobic001G499900 Sobic001G238100--Sobic009G032900 Sobic001G506100 Sobic001G506100 Sobic001G238100--Sobic001G506100 Sobic007G220400 Sobic007G220400 Sobic001G238100--Sobic007G220400 Sobic001G238100--Sobic002G392100 Sobic010G139100--Sobic009G032900 Sobic004G351200 Sobic004G351200 Sobic010G139100--Sobic004G351200 Sobic003G269900 Sobic003G269900 Sobic010G139100--Sobic003G269900 Sobic010G139100--Sobic005G216700 Sobic010G139100--Sobic006G135500 Sobic004G323000 Sobic004G323000 Sobic010G139100--Sobic004G323000 Sobic010G115000 Sobic010G115000 Sobic010G139100--Sobic010G115000 Sobic010G174100 Sobic010G174100 Sobic010G139100--Sobic010G174100 Sobic010G158400 Sobic010G158400 Sobic010G139100--Sobic010G158400 Sobic002G391400 Sobic002G391400 Sobic002G392100--Sobic002G391400 Sobic002G392100--Sobic007G206800 Sobic002G392100--Sobic002G334000 Sobic007G086300 Sobic007G086300 Sobic002G392100--Sobic007G086300 Sobic006G205700 Sobic006G205700 Sobic002G392100--Sobic006G205700 Sobic008G034900 Sobic008G034900 Sobic002G392100--Sobic008G034900 Sobic003G167300 Sobic003G167300 Sobic002G392100--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic002G392100--Sobic010G241900 Sobic002G392100--Sobic001G499900 Sobic005G216700--Sobic004G351200 Sobic005G216700--Sobic009G032900 Sobic005G216700--Sobic010G139100 Sobic005G216700--Sobic002G068000 Sobic005G216700--Sobic002G334000 Sobic005G216700--Sobic007G206800 Sobic005G216700--Sobic010G158400 Sobic005G080600 Sobic005G080600 Sobic005G216700--Sobic005G080600 Sobic005G216700--Sobic003G046700 Sobic002G068000--Sobic009G032900 Sobic002G068000--Sobic003G349400 Sobic002G068000--Sobic010G158400 Sobic010G234500 Sobic010G234500 Sobic002G068000--Sobic010G234500 Sobic002G068000--Sobic005G080600 Sobic009G259800 Sobic009G259800 Sobic002G068000--Sobic009G259800 Sobic003G426500 Sobic003G426500 Sobic002G068000--Sobic003G426500 Sobic002G068000--Sobic005G216700 Sobic010G066800 Sobic010G066800 Sobic002G068000--Sobic010G066800 Sobic009G032900--Sobic002G068000 Sobic009G032900--Sobic004G351200 Sobic009G032900--Sobic005G216700 Sobic009G032900--Sobic010G158400 Sobic009G032900--Sobic002G334000 Sobic009G032900--Sobic010G139100 Sobic009G032900--Sobic007G206800 Sobic009G032900--Sobic003G046700 Sobic009G032900--Sobic003G269900 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic010G191700 Sobic010G191700 Sobic002G334000--Sobic010G191700 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic005G226350 Sobic005G226350 Sobic002G334000--Sobic005G226350 Sobic010G128300 Sobic010G128300 Sobic002G334000--Sobic010G128300
Octagon: transcription factors


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