Gene annotation
Transcriptome id Sobic.010G162800.1
Synonym Sb10g021685
Functional annotation reticuline oxidase-like protein precursor, putative, expressed
UniProt C5Z482
Pfam PF08031 PF01565
Panther DB PTHR32448 PTHR32448:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G20820 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35630.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051098 , Zm00025a042340 , Zm00025a042341
Brachypodium KQJ94235 , KQJ81770 , KQJ83874 , KQK18046 , KQK18047 , KQJ98164
Barley HORVU7Hr1G089160.1 , HORVU7Hr1G089160.3 , HORVU7Hr1G089160.2 , HORVU2Hr1G122590.1 , HORVU7Hr1G026630.6 , HORVU7Hr1G026630.4 , HORVU7Hr1G026630.5 , HORVU7Hr1G026630.2 , HORVU7Hr1G026630.3 , HORVU7Hr1G026630.1 , HORVU7Hr1G089270.1 , HORVU7Hr1G093940.1 , HORVU4Hr1G086520.1 , HORVU2Hr1G000530.1 , HORVU3Hr1G020240.1 , HORVU2Hr1G021650.1 , HORVU2Hr1G021650.2
Wheat TraesCS4B02G391900 , TraesCS7B02G026000 , TraesCS7A02G354100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G237800 expansin precursor, putative, expressed -
2 Sobic.001G238000 expansin precursor, putative, expressed -
3 Sobic.003G064800 dirigent, putative, expressed -
4 Sobic.001G238200 expansin precursor, putative, expressed -
5 Sobic.010G234500 O-methyltransferase, putative, expressed -
6 Sobic.009G219200 expressed protein -
7 Sobic.005G127400 expressed protein -
8 Sobic.003G349400 expressed protein -
9 Sobic.004G306900 amino acid transporter, putative, expressed -
10 Sobic.002G377700 caltractin, putative, expressed -
11 Sobic.004G110200 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.002G255000 AIR12, putative, expressed -
14 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G068000 expressed protein -
16 Sobic.003G140700 peroxidase precursor, putative, expressed -
17 Sobic.001G182200 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
19 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
20 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -


Gene co-expression network
sample Sobic010G162800 Sobic010G162800 Sobic001G237800 Sobic001G237800 Sobic010G162800--Sobic001G237800 Sobic001G238000 Sobic001G238000 Sobic010G162800--Sobic001G238000 Sobic003G064800 Sobic003G064800 Sobic010G162800--Sobic003G064800 Sobic001G238200 Sobic001G238200 Sobic010G162800--Sobic001G238200 Sobic010G234500 Sobic010G234500 Sobic010G162800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic010G162800--Sobic009G219200 Sobic005G127400 Sobic005G127400 Sobic010G162800--Sobic005G127400 Sobic003G349400 Sobic003G349400 Sobic010G162800--Sobic003G349400 Sobic004G306900 Sobic004G306900 Sobic010G162800--Sobic004G306900 Sobic001G237800--Sobic009G219200 Sobic001G237800--Sobic010G162800 Sobic003G140700 Sobic003G140700 Sobic001G237800--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G237800--Sobic002G255000 Sobic001G237800--Sobic005G127400 Sobic001G237800--Sobic001G238000 Sobic001G237800--Sobic003G064800 Sobic001G237800--Sobic001G238200 Sobic009G035900 Sobic009G035900 Sobic001G237800--Sobic009G035900 Sobic002G377700 Sobic002G377700 Sobic001G238000--Sobic002G377700 Sobic001G238000--Sobic001G238200 Sobic001G238000--Sobic003G140700 Sobic001G238000--Sobic001G237800 Sobic001G238000--Sobic004G306900 Sobic001G238000--Sobic009G219200 Sobic001G238000--Sobic003G064800 Sobic001G238000--Sobic010G162800 Sobic006G028500 Sobic006G028500 Sobic001G238000--Sobic006G028500 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic010G234500--Sobic001G238200 Sobic009G186500 Sobic009G186500 Sobic010G234500--Sobic009G186500 Sobic002G068000 Sobic002G068000 Sobic010G234500--Sobic002G068000 Sobic010G234500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic010G234500--Sobic006G019700 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic006G225500 Sobic006G225500 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic004G110700 Sobic004G110700 Sobic005G127400--Sobic004G110700 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic007G100700 Sobic007G100700 Sobic003G349400--Sobic007G100700 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100
Octagon: transcription factors


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