Gene annotation
Transcriptome id Sobic.002G255000.1
Synonym Sb02g029020, AIR12
Functional annotation AIR12, putative, expressed
UniProt C5X4M5
Pfam PF04526
Panther DB PTHR23130 PTHR23130:SF96
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07390 : auxin-responsive family protein
RAP-DB (Rice) LOC_Os08g41290.1 : AIR12, putative, expressed
MaizeGDB (Corn) Zm00025a047542
Brachypodium KQJ90883
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G064800 dirigent, putative, expressed -
2 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
3 Sobic.001G438200 expressed protein -
4 Sobic.003G140700 peroxidase precursor, putative, expressed -
5 Sobic.005G127400 expressed protein -
6 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G238200 expansin precursor, putative, expressed -
9 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
10 Sobic.003G349400 expressed protein -
11 Sobic.010G234500 O-methyltransferase, putative, expressed -
12 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.004G306900 amino acid transporter, putative, expressed -
14 Sobic.009G219200 expressed protein -
15 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.001G237800 expansin precursor, putative, expressed -
18 Sobic.003G319400 receptor protein kinase, putative, expressed -
19 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
20 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -


Gene co-expression network
sample Sobic002G255000 Sobic002G255000 Sobic003G064800 Sobic003G064800 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic001G438200 Sobic001G438200 Sobic002G255000--Sobic001G438200 Sobic003G140700 Sobic003G140700 Sobic002G255000--Sobic003G140700 Sobic005G127400 Sobic005G127400 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic006G225500 Sobic006G225500 Sobic002G255000--Sobic006G225500 Sobic001G238200 Sobic001G238200 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic004G306900 Sobic004G306900 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic007G008600--Sobic002G255000 Sobic007G008600--Sobic007G100700 Sobic007G008600--Sobic003G064800 Sobic006G273300 Sobic006G273300 Sobic007G008600--Sobic006G273300 Sobic007G008600--Sobic006G106900 Sobic007G008600--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic007G008600--Sobic004G029100 Sobic003G182200 Sobic003G182200 Sobic007G008600--Sobic003G182200 Sobic007G008600--Sobic006G225500 Sobic001G438200--Sobic003G064800 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G438200--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic001G438200--Sobic004G306900 Sobic001G438200--Sobic006G273300 Sobic004G322100 Sobic004G322100 Sobic001G438200--Sobic004G322100 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic005G127400--Sobic003G064800 Sobic003G349400 Sobic003G349400 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic009G186500--Sobic001G238200 Sobic009G186500--Sobic003G349400 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic006G225500--Sobic007G008600 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238000 Sobic001G238000 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic007G100700--Sobic003G182200 Sobic003G426500 Sobic003G426500 Sobic007G100700--Sobic003G426500 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic008G011700 Sobic008G011700 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900
Octagon: transcription factors


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