Gene annotation
Transcriptome id Sobic.001G237800.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, Sb01g021030, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5X0H8
Pfam PF01357 PF03330
Panther DB PTHR31867 PTHR31867:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g06020.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a006813 , Zm00025a006808 , Zm00025a022026
Brachypodium KQK06963 , KQJ96857 , KQJ96855 , KQK01952 , KQJ97590
Barley HORVU4Hr1G072410.1 , HORVU4Hr1G072400.1 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7 , HORVU7Hr1G002440.4 , HORVU7Hr1G002440.3 , HORVU7Hr1G002440.2 , HORVU7Hr1G002440.1
Wheat TraesCS4A02G339200 , TraesCS4B02G271100 , TraesCS3B02G376800 , TraesCS1B02G156700 , TraesCS4A02G034300 , TraesCS3D02G175800 , TraesCS4A02G034400 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4D02G270200 , TraesCS4D02G270400 , TraesCS3A02G165900 , TraesCS3B02G376900 , TraesCS3D02G176000 , TraesCS3B02G199900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G219200 expressed protein -
2 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.003G140700 peroxidase precursor, putative, expressed -
4 Sobic.002G255000 AIR12, putative, expressed -
5 Sobic.005G127400 expressed protein -
6 Sobic.001G238000 expansin precursor, putative, expressed -
7 Sobic.003G064800 dirigent, putative, expressed -
8 Sobic.001G238200 expansin precursor, putative, expressed -
9 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
10 Sobic.003G349400 expressed protein -
11 Sobic.001G438200 expressed protein -
12 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
16 Sobic.010G234500 O-methyltransferase, putative, expressed -
17 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.004G306900 amino acid transporter, putative, expressed -
20 Sobic.004G110700 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G237800 Sobic001G237800 Sobic009G219200 Sobic009G219200 Sobic001G237800--Sobic009G219200 Sobic010G162800 Sobic010G162800 Sobic001G237800--Sobic010G162800 Sobic003G140700 Sobic003G140700 Sobic001G237800--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G237800--Sobic002G255000 Sobic005G127400 Sobic005G127400 Sobic001G237800--Sobic005G127400 Sobic001G238000 Sobic001G238000 Sobic001G237800--Sobic001G238000 Sobic003G064800 Sobic003G064800 Sobic001G237800--Sobic003G064800 Sobic001G238200 Sobic001G238200 Sobic001G237800--Sobic001G238200 Sobic009G035900 Sobic009G035900 Sobic001G237800--Sobic009G035900 Sobic009G219200--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic009G219200--Sobic001G438200 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic010G162800--Sobic001G237800 Sobic010G162800--Sobic001G238000 Sobic010G162800--Sobic003G064800 Sobic010G162800--Sobic001G238200 Sobic010G234500 Sobic010G234500 Sobic010G162800--Sobic010G234500 Sobic010G162800--Sobic009G219200 Sobic010G162800--Sobic005G127400 Sobic003G349400 Sobic003G349400 Sobic010G162800--Sobic003G349400 Sobic010G162800--Sobic004G306900 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic002G377700 Sobic002G377700 Sobic001G238000--Sobic002G377700 Sobic001G238000--Sobic001G238200 Sobic001G238000--Sobic003G140700 Sobic001G238000--Sobic001G237800 Sobic001G238000--Sobic004G306900 Sobic001G238000--Sobic009G219200 Sobic001G238000--Sobic003G064800 Sobic001G238000--Sobic010G162800 Sobic006G028500 Sobic006G028500 Sobic001G238000--Sobic006G028500 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic009G035900--Sobic001G237800 Sobic009G035900--Sobic005G127400 Sobic009G035900--Sobic006G150100 Sobic009G035900--Sobic003G349400 Sobic003G132400 Sobic003G132400 Sobic009G035900--Sobic003G132400 Sobic006G170600 Sobic006G170600 Sobic009G035900--Sobic006G170600 Sobic008G121900 Sobic008G121900 Sobic009G035900--Sobic008G121900 Sobic002G003700 Sobic002G003700 Sobic009G035900--Sobic002G003700 Sobic009G035900--Sobic010G162800
Octagon: transcription factors


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