Gene annotation
Transcriptome id Sobic.009G186500.1
Synonym RCI3A, Sb09g024580, RCI3
Functional annotation peroxidase precursor, putative, expressed
UniProt C5Z0E3
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF81
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G05260 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os05g41990.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a054380 , Zm00025a021632 , Zm00025a055305 , Zm00025a034847 , Zm00025a035126 , Zm00025a000294 , Zm00025a044120
Brachypodium KQK23931 , KQK17328 , KQK05559 , KQK04040 , KQK10120 , KQK04037 , KQK05561 , KQK05560
Barley HORVU4Hr1G016940.1 , HORVU4Hr1G016940.3 , HORVU1Hr1G066550.1 , HORVU3Hr1G077580.4 , HORVU3Hr1G077580.2 , HORVU4Hr1G084920.9 , HORVU4Hr1G084920.5 , HORVU1Hr1G066610.2 , HORVU1Hr1G066610.3 , HORVU1Hr1G066610.1 , HORVU1Hr1G066610.4 , HORVU1Hr1G066580.1 , HORVU7Hr1G102480.1 , HORVU7Hr1G102480.2 , HORVU7Hr1G102480.3 , HORVU7Hr1G102480.7 , HORVU1Hr1G066600.1 , HORVU2Hr1G107350.14 , HORVU2Hr1G107350.15 , HORVU3Hr1G077580.5 , HORVU1Hr1G066540.1
Wheat TraesCS1B02G330400 , TraesCS1B02G330400 , TraesCS1B02G331200 , TraesCS1B02G330800 , TraesCS6B02G354600 , TraesCS1D02G318500 , TraesCS1A02G078200 , TraesCS1A02G318900 , TraesCS1A02G318700 , TraesCS7D02G420500 , TraesCS1D02G318200 , TraesCS1B02G330800 , TraesCS1D02G318400 , TraesCS1A02G318000 , TraesCS7B02G353100 , TraesCS4D02G102600 , TraesCS1D02G318600 , TraesCS3A02G325100 , TraesCS3A02G325100 , TraesCS4B02G105800 , TraesCS3D02G318500 , TraesCS1A02G318500 , TraesCS1A02G318500 , TraesCS1B02G330500 , TraesCS7A02G452900 , TraesCS1D02G318300 , TraesCS1D02G317800 , TraesCS1D02G317700 , TraesCS7A02G453000 , TraesCS1A02G318200 , TraesCS2D02G153800 , TraesCS1D02G317900 , TraesCS1A02G318400 , TraesCS7D02G442200 , TraesCS4B02G340100 , TraesCS7A02G428200 , TraesCS1B02G330600 , TraesCS4B02G340200 , TraesCS7D02G442300 , TraesCS4D02G342600 , TraesCS6A02G324200 , TraesCS7B02G328400 , TraesCS1D02G318100 , TraesCS1D02G080400 , TraesCS2D02G036700 , TraesCS1A02G317900 , TraesCS1A02G318600 , TraesCS1B02G330200 , TraesCS6D02G303900 , TraesCS1A02G318300 , TraesCS1B02G330700 , TraesCS1D02G318000 , TraesCS4A02G201700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.002G255000 AIR12, putative, expressed -
3 Sobic.001G319300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.005G127400 expressed protein -
5 Sobic.010G234500 O-methyltransferase, putative, expressed -
6 Sobic.003G064800 dirigent, putative, expressed -
7 Sobic.003G140700 peroxidase precursor, putative, expressed -
8 Sobic.001G238200 expansin precursor, putative, expressed -
9 Sobic.003G349400 expressed protein -
10 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
11 Sobic.001G237800 expansin precursor, putative, expressed -
12 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
13 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
14 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
15 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
16 Sobic.004G306900 amino acid transporter, putative, expressed -
17 Sobic.006G103300 wound/stress protein, putative, expressed -
18 Sobic.009G219200 expressed protein -
19 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic009G186500 Sobic009G186500 Sobic006G225500 Sobic006G225500 Sobic009G186500--Sobic006G225500 Sobic002G255000 Sobic002G255000 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic005G127400 Sobic005G127400 Sobic009G186500--Sobic005G127400 Sobic010G234500 Sobic010G234500 Sobic009G186500--Sobic010G234500 Sobic003G064800 Sobic003G064800 Sobic009G186500--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic009G186500--Sobic003G140700 Sobic001G238200 Sobic001G238200 Sobic009G186500--Sobic001G238200 Sobic003G349400 Sobic003G349400 Sobic009G186500--Sobic003G349400 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic002G255000--Sobic003G064800 Sobic002G255000--Sobic007G008600 Sobic001G438200 Sobic001G438200 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic001G319300--Sobic009G186500 Sobic007G086300 Sobic007G086300 Sobic001G319300--Sobic007G086300 Sobic001G319300--Sobic002G255000 Sobic008G034900 Sobic008G034900 Sobic001G319300--Sobic008G034900 Sobic004G110200 Sobic004G110200 Sobic001G319300--Sobic004G110200 Sobic001G319300--Sobic003G064800 Sobic002G392100 Sobic002G392100 Sobic001G319300--Sobic002G392100 Sobic003G400900 Sobic003G400900 Sobic001G319300--Sobic003G400900 Sobic001G182200 Sobic001G182200 Sobic001G319300--Sobic001G182200 Sobic005G127400--Sobic003G064800 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic004G110700 Sobic004G110700 Sobic005G127400--Sobic004G110700 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic010G234500--Sobic001G238200 Sobic010G234500--Sobic009G186500 Sobic002G068000 Sobic002G068000 Sobic010G234500--Sobic002G068000 Sobic004G306900 Sobic004G306900 Sobic010G234500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic010G234500--Sobic006G019700 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238000 Sobic001G238000 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic003G349400--Sobic005G127400 Sobic003G349400--Sobic010G234500 Sobic003G349400--Sobic002G068000 Sobic003G349400--Sobic006G150100 Sobic003G349400--Sobic002G255000 Sobic003G349400--Sobic003G064800 Sobic010G066800 Sobic010G066800 Sobic003G349400--Sobic010G066800 Sobic003G349400--Sobic004G110700 Sobic003G349400--Sobic007G100700
Octagon: transcription factors


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