Gene annotation
Transcriptome id Sobic.006G103300.1
Synonym Sb06g018680
Functional annotation wound/stress protein, putative, expressed
UniProt A0A1Z5RDW4
Pfam PF01477
Panther DB PTHR31718 PTHR31718:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G39730 : Lipase/lipooxygenase, PLAT/LH2 family protein
RAP-DB (Rice) LOC_Os04g38370.1 : wound/stress protein, putative, expressed
MaizeGDB (Corn) Zm00025a011142
Brachypodium -
Barley HORVU6Hr1G074940.2 , HORVU6Hr1G074940.3 , HORVU6Hr1G074940.1
Wheat TraesCS2D02G319800 , TraesCS2B02G339800 , TraesCS2A02G342100 , TraesCS6D02G280900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G127400 expressed protein -
2 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G064800 dirigent, putative, expressed -
5 Sobic.003G140700 peroxidase precursor, putative, expressed -
6 Sobic.010G234500 O-methyltransferase, putative, expressed -
7 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
8 Sobic.004G110700 DNA binding protein, putative, expressed -
9 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
10 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
11 Sobic.001G238200 expansin precursor, putative, expressed -
12 Sobic.005G166700 sulfotransferase domain containing protein, expressed -
13 Sobic.010G127800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.003G349400 expressed protein -
15 Sobic.004G322100 hypro1, putative, expressed -
16 Sobic.002G255000 AIR12, putative, expressed -
17 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
18 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
19 Sobic.003G140600 peroxidase precursor, putative, expressed -
20 Sobic.001G414800 dirigent, putative, expressed -


Gene co-expression network
sample Sobic006G103300 Sobic006G103300 Sobic005G127400 Sobic005G127400 Sobic006G103300--Sobic005G127400 Sobic006G225500 Sobic006G225500 Sobic006G103300--Sobic006G225500 Sobic009G186500 Sobic009G186500 Sobic006G103300--Sobic009G186500 Sobic003G064800 Sobic003G064800 Sobic006G103300--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic006G103300--Sobic003G140700 Sobic010G234500 Sobic010G234500 Sobic006G103300--Sobic010G234500 Sobic007G008600 Sobic007G008600 Sobic006G103300--Sobic007G008600 Sobic004G110700 Sobic004G110700 Sobic006G103300--Sobic004G110700 Sobic010G088800 Sobic010G088800 Sobic006G103300--Sobic010G088800 Sobic005G127400--Sobic003G064800 Sobic003G349400 Sobic003G349400 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic002G255000 Sobic002G255000 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic006G225500--Sobic007G008600 Sobic009G186500--Sobic006G225500 Sobic009G186500--Sobic002G255000 Sobic001G319300 Sobic001G319300 Sobic009G186500--Sobic001G319300 Sobic009G186500--Sobic005G127400 Sobic009G186500--Sobic010G234500 Sobic009G186500--Sobic003G064800 Sobic009G186500--Sobic003G140700 Sobic001G238200 Sobic001G238200 Sobic009G186500--Sobic001G238200 Sobic009G186500--Sobic003G349400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic004G306900 Sobic004G306900 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic010G234500--Sobic001G238200 Sobic010G234500--Sobic009G186500 Sobic002G068000 Sobic002G068000 Sobic010G234500--Sobic002G068000 Sobic010G234500--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic010G234500--Sobic006G019700 Sobic007G008600--Sobic002G255000 Sobic007G100700 Sobic007G100700 Sobic007G008600--Sobic007G100700 Sobic007G008600--Sobic003G064800 Sobic007G008600--Sobic006G273300 Sobic007G008600--Sobic006G106900 Sobic007G008600--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic007G008600--Sobic004G029100 Sobic003G182200 Sobic003G182200 Sobic007G008600--Sobic003G182200 Sobic007G008600--Sobic006G225500 Sobic006G028500 Sobic006G028500 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic004G110700--Sobic006G019700 Sobic007G090460 Sobic007G090460 Sobic010G088800--Sobic007G090460 Sobic003G140600 Sobic003G140600 Sobic010G088800--Sobic003G140600 Sobic010G088800--Sobic006G103300 Sobic006G172500 Sobic006G172500 Sobic010G088800--Sobic006G172500 Sobic006G172550 Sobic006G172550 Sobic010G088800--Sobic006G172550 Sobic010G088800--Sobic006G225500 Sobic005G166700 Sobic005G166700 Sobic010G088800--Sobic005G166700 Sobic002G085900 Sobic002G085900 Sobic010G088800--Sobic002G085900 Sobic010G088800--Sobic007G008600
Octagon: transcription factors


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