Gene annotation
Transcriptome id Sobic.007G008600.1,Sobic.007G008600.2
Synonym Sb07g000920, GLTP2
Functional annotation GLTP domain containing protein, putative, expressed
UniProt A0A1B6PEU1 , A0A1B6PEU6
Pfam PF08718
Panther DB PTHR10219 PTHR10219:SF40
NCBI CDD KOG3221; Glycolipid transfer protein
KEGG Orthology -
Gene Ontology GO:0017089; glycolipid transfer activity GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT1G21360 : glycolipid transfer protein 2
RAP-DB (Rice) LOC_Os08g01710.1 : GLTP domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a040176
Brachypodium -
Barley -
Wheat TraesCS5A02G489300 , TraesCS5A02G489400 , TraesCS4B02G397500 , TraesCS4B02G397500 , TraesCSU02G035500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G255000 AIR12, putative, expressed -
2 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
3 Sobic.003G064800 dirigent, putative, expressed -
4 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
5 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.005G127400 expressed protein -
7 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
8 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
9 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.003G349400 expressed protein -
11 Sobic.003G140700 peroxidase precursor, putative, expressed -
12 Sobic.001G438200 expressed protein -
13 Sobic.010G234500 O-methyltransferase, putative, expressed -
14 Sobic.001G238200 expansin precursor, putative, expressed -
15 Sobic.001G414800 dirigent, putative, expressed -
16 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
17 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.004G322100 hypro1, putative, expressed -
19 Sobic.004G306900 amino acid transporter, putative, expressed -
20 Sobic.005G166700 sulfotransferase domain containing protein, expressed -


Gene co-expression network
sample Sobic007G008600 Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic007G008600--Sobic002G255000 Sobic007G100700 Sobic007G100700 Sobic007G008600--Sobic007G100700 Sobic003G064800 Sobic003G064800 Sobic007G008600--Sobic003G064800 Sobic006G273300 Sobic006G273300 Sobic007G008600--Sobic006G273300 Sobic006G106900 Sobic006G106900 Sobic007G008600--Sobic006G106900 Sobic005G127400 Sobic005G127400 Sobic007G008600--Sobic005G127400 Sobic004G029100 Sobic004G029100 Sobic007G008600--Sobic004G029100 Sobic003G182200 Sobic003G182200 Sobic007G008600--Sobic003G182200 Sobic006G225500 Sobic006G225500 Sobic007G008600--Sobic006G225500 Sobic002G255000--Sobic003G064800 Sobic002G255000--Sobic007G008600 Sobic001G438200 Sobic001G438200 Sobic002G255000--Sobic001G438200 Sobic003G140700 Sobic003G140700 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic001G238200 Sobic001G238200 Sobic002G255000--Sobic001G238200 Sobic002G255000--Sobic007G100700 Sobic007G100700--Sobic003G182200 Sobic003G426500 Sobic003G426500 Sobic007G100700--Sobic003G426500 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic008G011700 Sobic008G011700 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic007G100700--Sobic004G306900 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic006G273300--Sobic002G255000 Sobic006G273300--Sobic001G438200 Sobic006G273300--Sobic007G008600 Sobic006G273300--Sobic003G140700 Sobic006G273300--Sobic003G064800 Sobic006G273300--Sobic006G225500 Sobic006G273300--Sobic005G127400 Sobic006G273300--Sobic004G029100 Sobic002G183700 Sobic002G183700 Sobic006G273300--Sobic002G183700 Sobic003G319400 Sobic003G319400 Sobic006G106900--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic009G181600 Sobic009G181600 Sobic006G106900--Sobic009G181600 Sobic006G106900--Sobic001G438200 Sobic003G280000 Sobic003G280000 Sobic006G106900--Sobic003G280000 Sobic005G127400--Sobic003G064800 Sobic003G349400 Sobic003G349400 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic004G110700 Sobic004G110700 Sobic005G127400--Sobic004G110700 Sobic004G322100 Sobic004G322100 Sobic004G029100--Sobic004G322100 Sobic004G029100--Sobic002G183700 Sobic010G152400 Sobic010G152400 Sobic004G029100--Sobic010G152400 Sobic007G158800 Sobic007G158800 Sobic004G029100--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic004G029100--Sobic003G000100 Sobic004G029100--Sobic007G008600 Sobic001G502000 Sobic001G502000 Sobic004G029100--Sobic001G502000 Sobic004G029100--Sobic003G182200 Sobic008G019800 Sobic008G019800 Sobic004G029100--Sobic008G019800 Sobic003G182200--Sobic007G100700 Sobic006G019700 Sobic006G019700 Sobic003G182200--Sobic006G019700 Sobic003G182200--Sobic003G426500 Sobic006G092700 Sobic006G092700 Sobic003G182200--Sobic006G092700 Sobic003G182200--Sobic008G011700 Sobic003G182200--Sobic004G306900 Sobic003G182200--Sobic004G322100 Sobic009G259800 Sobic009G259800 Sobic003G182200--Sobic009G259800 Sobic003G182200--Sobic007G008600 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G225500--Sobic006G273300 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic006G225500--Sobic007G008600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.