Gene annotation
Transcriptome id Sobic.004G029100.1,Sobic.004G029100.2
Synonym Sb04g002560
Functional annotation periplasmic beta-glucosidase precursor, putative, expressed
UniProt C5XTT9
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF23
NCBI CDD -
KEGG Orthology K05349; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20950 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os02g03870.1 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016801 , Zm00025a008146 , Zm00025a008148 , Zm00025a034995
Brachypodium KQK13208 , KQK13203 , KQK13202 , KQK13201 , KQK13200 , KQK13206 , KQK13199
Barley HORVU7Hr1G068460.1 , HORVU7Hr1G068460.3 , HORVU7Hr1G068460.2 , HORVU7Hr1G068460.4 , HORVU5Hr1G095130.1 , HORVU5Hr1G095130.3 , HORVU5Hr1G095130.2 , HORVU5Hr1G095060.22 , HORVU5Hr1G095130.4 , HORVU5Hr1G095130.9 , HORVU5Hr1G095130.8 , HORVU5Hr1G095040.1 , HORVU5Hr1G095080.20 , HORVU5Hr1G095130.5 , HORVU5Hr1G095130.7 , HORVU5Hr1G095130.6 , HORVU5Hr1G095080.9 , HORVU5Hr1G095080.8 , HORVU5Hr1G095080.1 , HORVU5Hr1G095080.3 , HORVU5Hr1G095080.2 , HORVU5Hr1G095080.5 , HORVU5Hr1G095080.4 , HORVU5Hr1G095080.7 , HORVU5Hr1G095080.6 , HORVU2Hr1G107600.6 , HORVU2Hr1G107600.7 , HORVU2Hr1G107600.1 , HORVU5Hr1G095080.19 , HORVU5Hr1G095080.18 , HORVU5Hr1G095080.15 , HORVU5Hr1G095080.14 , HORVU5Hr1G095080.17 , HORVU5Hr1G095080.16 , HORVU5Hr1G095080.11 , HORVU5Hr1G095080.10 , HORVU5Hr1G095080.13 , HORVU5Hr1G095080.12 , HORVU2Hr1G119350.1 , HORVU2Hr1G119350.3 , HORVU2Hr1G119350.2 , HORVU2Hr1G119350.4 , HORVU3Hr1G034870.7 , HORVU3Hr1G034870.6 , HORVU3Hr1G034870.5 , HORVU3Hr1G034870.4 , HORVU3Hr1G034870.3 , HORVU3Hr1G034870.2 , HORVU3Hr1G034870.1 , HORVU5Hr1G095130.15 , HORVU5Hr1G095130.14 , HORVU5Hr1G095130.17 , HORVU5Hr1G095130.16 , HORVU5Hr1G095130.11 , HORVU5Hr1G095130.13 , HORVU5Hr1G095130.12 , HORVU5Hr1G095130.18 , HORVU5Hr1G095060.7 , HORVU5Hr1G095060.6 , HORVU5Hr1G095060.4 , HORVU5Hr1G095060.3 , HORVU5Hr1G095060.2 , HORVU5Hr1G095060.9 , HORVU5Hr1G095060.8 , HORVU5Hr1G095060.19 , HORVU5Hr1G095060.18 , HORVU5Hr1G095060.17 , HORVU5Hr1G095060.14 , HORVU5Hr1G095060.12 , HORVU5Hr1G095060.11 , HORVU5Hr1G095060.10
Wheat TraesCS5A02G388300 , TraesCS2B02G503000 , TraesCS2B02G503000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS2D02G562400 , TraesCS5D02G398300 , TraesCS5D02G398300 , TraesCS5B02G393900 , TraesCS5D02G398900 , TraesCS5A02G388400 , TraesCS2A02G591900 , TraesCS3B02G203300 , TraesCS3B02G203300 , TraesCS2B02G591900 , TraesCS2B02G591900 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5B02G394000 , TraesCS2A02G478500 , TraesCS5D02G398400 , TraesCS5A02G388200 , TraesCS3D02G179000 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS3A02G172500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G322100 hypro1, putative, expressed -
2 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
3 Sobic.010G152400 glycosyltransferase, putative, expressed -
4 Sobic.007G158800 patatin, putative, expressed -
5 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
6 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
7 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
8 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
9 Sobic.008G019800 - -
10 Sobic.001G438200 expressed protein -
11 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.006G019700 transferase family protein, putative, expressed -
13 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
14 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
15 Sobic.003G140700 peroxidase precursor, putative, expressed -
16 Sobic.008G068300 transferase family protein, putative, expressed -
17 Sobic.002G385500 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
18 Sobic.004G119600 expansin precursor, putative, expressed -
19 Sobic.002G255000 AIR12, putative, expressed -
20 Sobic.004G306900 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic004G029100 Sobic004G029100 Sobic004G322100 Sobic004G322100 Sobic004G029100--Sobic004G322100 Sobic002G183700 Sobic002G183700 Sobic004G029100--Sobic002G183700 Sobic010G152400 Sobic010G152400 Sobic004G029100--Sobic010G152400 Sobic007G158800 Sobic007G158800 Sobic004G029100--Sobic007G158800 Sobic003G000100 Sobic003G000100 Sobic004G029100--Sobic003G000100 Sobic007G008600 Sobic007G008600 Sobic004G029100--Sobic007G008600 Sobic001G502000 Sobic001G502000 Sobic004G029100--Sobic001G502000 Sobic003G182200 Sobic003G182200 Sobic004G029100--Sobic003G182200 Sobic008G019800 Sobic008G019800 Sobic004G029100--Sobic008G019800 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic003G140700 Sobic003G140700 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G306900 Sobic004G306900 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic003G240400 Sobic003G240400 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic010G152400--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic010G152400--Sobic010G082000 Sobic006G003100 Sobic006G003100 Sobic010G152400--Sobic006G003100 Sobic004G106100 Sobic004G106100 Sobic010G152400--Sobic004G106100 Sobic010G152400--Sobic006G019700 Sobic007G158800--Sobic001G502000 Sobic001G229000 Sobic001G229000 Sobic007G158800--Sobic001G229000 Sobic007G158800--Sobic002G183700 Sobic007G158800--Sobic006G089000 Sobic005G222500 Sobic005G222500 Sobic007G158800--Sobic005G222500 Sobic007G158800--Sobic004G029100 Sobic007G158800--Sobic003G000100 Sobic007G158800--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic007G158800--Sobic007G086300 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300 Sobic002G255000 Sobic002G255000 Sobic007G008600--Sobic002G255000 Sobic007G100700 Sobic007G100700 Sobic007G008600--Sobic007G100700 Sobic003G064800 Sobic003G064800 Sobic007G008600--Sobic003G064800 Sobic006G273300 Sobic006G273300 Sobic007G008600--Sobic006G273300 Sobic006G106900 Sobic006G106900 Sobic007G008600--Sobic006G106900 Sobic005G127400 Sobic005G127400 Sobic007G008600--Sobic005G127400 Sobic007G008600--Sobic004G029100 Sobic007G008600--Sobic003G182200 Sobic007G008600--Sobic006G225500 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic001G502000--Sobic006G089000 Sobic001G502000--Sobic002G183700 Sobic001G502000--Sobic001G229000 Sobic001G261509 Sobic001G261509 Sobic001G502000--Sobic001G261509 Sobic001G502000--Sobic004G029100 Sobic003G400900 Sobic003G400900 Sobic001G502000--Sobic003G400900 Sobic001G502000--Sobic008G019800 Sobic003G182200--Sobic007G100700 Sobic003G182200--Sobic006G019700 Sobic003G426500 Sobic003G426500 Sobic003G182200--Sobic003G426500 Sobic003G182200--Sobic006G092700 Sobic008G011700 Sobic008G011700 Sobic003G182200--Sobic008G011700 Sobic003G182200--Sobic004G306900 Sobic003G182200--Sobic004G322100 Sobic009G259800 Sobic009G259800 Sobic003G182200--Sobic009G259800 Sobic003G182200--Sobic007G008600 Sobic008G019800--Sobic001G229000 Sobic001G438200 Sobic001G438200 Sobic008G019800--Sobic001G438200 Sobic008G019800--Sobic010G152400 Sobic008G019800--Sobic004G029100 Sobic008G019800--Sobic001G502000 Sobic008G019800--Sobic004G322100 Sobic008G019800--Sobic007G158800 Sobic008G019800--Sobic002G183700 Sobic008G019800--Sobic004G306900
Octagon: transcription factors


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