Gene annotation
Transcriptome id Sobic.004G119600.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, EXPA11, Sb04g009970
Functional annotation expansin precursor, putative, expressed
UniProt C5XZL8
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os02g16730.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a019878 , Zm00025a019879 , Zm00025a040298 , Zm00025a040299 , Zm00025a019856 , Zm00025a040300
Brachypodium KQK23578 , KQK03594 , KQK21504
Barley HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU1Hr1G069830.2 , HORVU1Hr1G069830.1 , HORVU1Hr1G069830.7 , HORVU1Hr1G069830.6 , HORVU1Hr1G069830.4 , HORVU5Hr1G113580.5 , HORVU5Hr1G106500.6 , HORVU5Hr1G106500.5 , HORVU5Hr1G106500.4 , HORVU5Hr1G106500.3 , HORVU5Hr1G106500.2 , HORVU5Hr1G106500.1 , HORVU5Hr1G113580.4 , HORVU5Hr1G113580.6 , HORVU5Hr1G113580.3 , HORVU5Hr1G113580.2
Wheat TraesCS6A02G307900 , TraesCS2A02G393700 , TraesCS4A02G339200 , TraesCS5D02G494800 , TraesCS5A02G481200 , TraesCS5A02G443400 , TraesCS5B02G548500 , TraesCS5B02G448000 , TraesCS5D02G450900 , TraesCS5D02G535500 , TraesCS6D02G287100 , TraesCS6D02G287100 , TraesCS3A02G165900 , TraesCS5B02G494400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G158800 patatin, putative, expressed -
2 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
3 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
4 Sobic.008G019800 - -
5 Sobic.010G152400 glycosyltransferase, putative, expressed -
6 Sobic.002G385500 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
7 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
8 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
9 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
10 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
11 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
12 Sobic.004G322100 hypro1, putative, expressed -
13 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
14 Sobic.002G216100 cytochrome P450, putative, expressed -
15 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.002G233200 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
18 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
19 Sobic.008G068300 transferase family protein, putative, expressed -
20 Sobic.004G306900 amino acid transporter, putative, expressed -


Gene co-expression network
sample Sobic004G119600 Sobic004G119600 Sobic007G158800 Sobic007G158800 Sobic004G119600--Sobic007G158800 Sobic004G029100 Sobic004G029100 Sobic004G119600--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic004G119600--Sobic001G502000 Sobic008G019800 Sobic008G019800 Sobic004G119600--Sobic008G019800 Sobic010G152400 Sobic010G152400 Sobic004G119600--Sobic010G152400 Sobic002G385500 Sobic002G385500 Sobic004G119600--Sobic002G385500 Sobic002G183700 Sobic002G183700 Sobic004G119600--Sobic002G183700 Sobic003G000100 Sobic003G000100 Sobic004G119600--Sobic003G000100 Sobic001G229000 Sobic001G229000 Sobic004G119600--Sobic001G229000 Sobic007G158800--Sobic001G502000 Sobic007G158800--Sobic001G229000 Sobic007G158800--Sobic002G183700 Sobic006G089000 Sobic006G089000 Sobic007G158800--Sobic006G089000 Sobic005G222500 Sobic005G222500 Sobic007G158800--Sobic005G222500 Sobic007G158800--Sobic004G029100 Sobic007G158800--Sobic003G000100 Sobic006G003100 Sobic006G003100 Sobic007G158800--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic007G158800--Sobic007G086300 Sobic004G322100 Sobic004G322100 Sobic004G029100--Sobic004G322100 Sobic004G029100--Sobic002G183700 Sobic004G029100--Sobic010G152400 Sobic004G029100--Sobic007G158800 Sobic004G029100--Sobic003G000100 Sobic007G008600 Sobic007G008600 Sobic004G029100--Sobic007G008600 Sobic004G029100--Sobic001G502000 Sobic003G182200 Sobic003G182200 Sobic004G029100--Sobic003G182200 Sobic004G029100--Sobic008G019800 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic001G502000--Sobic006G089000 Sobic001G502000--Sobic002G183700 Sobic001G502000--Sobic001G229000 Sobic001G261509 Sobic001G261509 Sobic001G502000--Sobic001G261509 Sobic001G502000--Sobic004G029100 Sobic003G400900 Sobic003G400900 Sobic001G502000--Sobic003G400900 Sobic001G502000--Sobic008G019800 Sobic008G019800--Sobic001G229000 Sobic001G438200 Sobic001G438200 Sobic008G019800--Sobic001G438200 Sobic008G019800--Sobic010G152400 Sobic008G019800--Sobic004G029100 Sobic008G019800--Sobic001G502000 Sobic008G019800--Sobic004G322100 Sobic008G019800--Sobic007G158800 Sobic008G019800--Sobic002G183700 Sobic004G306900 Sobic004G306900 Sobic008G019800--Sobic004G306900 Sobic010G152400--Sobic003G000100 Sobic010G152400--Sobic004G322100 Sobic003G240400 Sobic003G240400 Sobic010G152400--Sobic003G240400 Sobic010G152400--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic010G152400--Sobic006G092700 Sobic010G082000 Sobic010G082000 Sobic010G152400--Sobic010G082000 Sobic010G152400--Sobic006G003100 Sobic004G106100 Sobic004G106100 Sobic010G152400--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic010G152400--Sobic006G019700 Sobic002G385500--Sobic003G000100 Sobic002G385500--Sobic010G152400 Sobic002G385500--Sobic004G029100 Sobic009G088500 Sobic009G088500 Sobic002G385500--Sobic009G088500 Sobic002G385500--Sobic006G003100 Sobic002G385500--Sobic008G019800 Sobic008G068300 Sobic008G068300 Sobic002G385500--Sobic008G068300 Sobic002G385500--Sobic004G322100 Sobic002G385500--Sobic006G089000 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic003G140700 Sobic003G140700 Sobic002G183700--Sobic003G140700 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic003G000100--Sobic006G003100 Sobic003G000100--Sobic004G306900 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic004G271800 Sobic004G271800 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic003G000100--Sobic007G086300 Sobic001G229000--Sobic007G158800 Sobic006G028500 Sobic006G028500 Sobic001G229000--Sobic006G028500 Sobic001G229000--Sobic004G322100 Sobic001G229000--Sobic001G502000 Sobic001G229000--Sobic007G086300 Sobic004G110700 Sobic004G110700 Sobic001G229000--Sobic004G110700 Sobic001G229000--Sobic010G152400 Sobic001G229000--Sobic004G306900 Sobic001G229000--Sobic008G019800
Octagon: transcription factors


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