Gene annotation
Transcriptome id Sobic.005G222500.1
Synonym PLD, PLDALPHA1, Sb05g027210
Functional annotation phospholipase D, putative, expressed
UniProt C5Y8F2
Pfam PF00168 PF00614 PF12357
Panther DB PTHR18896 PTHR18896:SF11
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0005515; protein binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G15730 : phospholipase D alpha 1
RAP-DB (Rice) LOC_Os06g40190.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a051292 , Zm00025a043052 , Zm00025a035726 , Zm00025a013932 , Zm00025a023249
Brachypodium KQK17763 , KQK21428 , KQK21427
Barley HORVU7Hr1G089960.4 , HORVU7Hr1G089960.1 , HORVU7Hr1G089960.3 , HORVU1Hr1G025370.4 , HORVU1Hr1G025370.1 , HORVU1Hr1G025370.2 , HORVU1Hr1G025370.3 , HORVU1Hr1G082940.1 , HORVU1Hr1G082940.2 , HORVU1Hr1G082940.3 , HORVU1Hr1G082950.13 , HORVU1Hr1G082950.12 , HORVU1Hr1G082950.10 , HORVU1Hr1G082950.11 , HORVU5Hr1G064520.6 , HORVU5Hr1G064520.7 , HORVU5Hr1G064520.4 , HORVU5Hr1G064520.5 , HORVU5Hr1G064520.2 , HORVU5Hr1G064520.3 , HORVU5Hr1G064520.1 , HORVU5Hr1G064520.8 , HORVU7Hr1G089960.5 , HORVU1Hr1G082950.9 , HORVU1Hr1G082950.8 , HORVU1Hr1G082950.3 , HORVU1Hr1G082950.2 , HORVU1Hr1G082950.1 , HORVU1Hr1G082950.7 , HORVU1Hr1G082950.6 , HORVU1Hr1G082950.5 , HORVU1Hr1G082950.4 , HORVU1Hr1G082890.6 , HORVU1Hr1G082890.4 , HORVU1Hr1G082890.5 , HORVU1Hr1G082890.2 , HORVU1Hr1G082890.3
Wheat TraesCS4B02G352300 , TraesCS4B02G352300 , TraesCS7A02G545000 , TraesCS5A02G520900 , TraesCS7D02G372800 , TraesCS5D02G231100 , TraesCS7B02G468200 , TraesCS7B02G277900 , TraesCS7B02G277900 , TraesCS4B02G377600 , TraesCS1B02G050400 , TraesCS1B02G135200 , TraesCS1B02G135200 , TraesCS7A02G544900 , TraesCSU02G145400 , TraesCSU02G145400 , TraesCS1D02G116700 , TraesCS5B02G222500 , TraesCS1D02G035800 , TraesCS1D02G035800 , TraesCS1A02G115300 , TraesCS7D02G531200 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS7A02G376500 , TraesCS5A02G223500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
2 Sobic.007G158800 patatin, putative, expressed -
3 Sobic.001G261509 - K09872: aquaporin PIP
4 Sobic.004G299600 - -
5 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
6 Sobic.001G242100 expressed protein -
7 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.009G065800 - -
9 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
10 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
11 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
12 Sobic.010G128400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
14 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.001G232700 - -
16 Sobic.001G438200 expressed protein -
17 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
18 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
19 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
20 Sobic.001G187300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -


Gene co-expression network
sample Sobic005G222500 Sobic005G222500 Sobic001G502000 Sobic001G502000 Sobic005G222500--Sobic001G502000 Sobic007G158800 Sobic007G158800 Sobic005G222500--Sobic007G158800 Sobic001G261509 Sobic001G261509 Sobic005G222500--Sobic001G261509 Sobic004G299600 Sobic004G299600 Sobic005G222500--Sobic004G299600 Sobic003G400900 Sobic003G400900 Sobic005G222500--Sobic003G400900 Sobic001G242100 Sobic001G242100 Sobic005G222500--Sobic001G242100 Sobic002G301900 Sobic002G301900 Sobic005G222500--Sobic002G301900 Sobic009G065800 Sobic009G065800 Sobic005G222500--Sobic009G065800 Sobic007G158600 Sobic007G158600 Sobic005G222500--Sobic007G158600 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic006G089000 Sobic006G089000 Sobic001G502000--Sobic006G089000 Sobic002G183700 Sobic002G183700 Sobic001G502000--Sobic002G183700 Sobic001G229000 Sobic001G229000 Sobic001G502000--Sobic001G229000 Sobic001G502000--Sobic001G261509 Sobic004G029100 Sobic004G029100 Sobic001G502000--Sobic004G029100 Sobic001G502000--Sobic003G400900 Sobic008G019800 Sobic008G019800 Sobic001G502000--Sobic008G019800 Sobic007G158800--Sobic001G502000 Sobic007G158800--Sobic001G229000 Sobic007G158800--Sobic002G183700 Sobic007G158800--Sobic006G089000 Sobic007G158800--Sobic005G222500 Sobic007G158800--Sobic004G029100 Sobic003G000100 Sobic003G000100 Sobic007G158800--Sobic003G000100 Sobic006G003100 Sobic006G003100 Sobic007G158800--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic007G158800--Sobic007G086300 Sobic001G261509--Sobic001G502000 Sobic001G261509--Sobic005G222500 Sobic001G261509--Sobic007G158800 Sobic001G261509--Sobic006G089000 Sobic001G261509--Sobic002G183700 Sobic001G261509--Sobic004G029100 Sobic006G277500 Sobic006G277500 Sobic001G261509--Sobic006G277500 Sobic001G261509--Sobic007G158600 Sobic008G068300 Sobic008G068300 Sobic001G261509--Sobic008G068300 Sobic004G299600--Sobic005G222500 Sobic004G299600--Sobic001G502000 Sobic004G299600--Sobic003G400900 Sobic004G299600--Sobic002G301900 Sobic004G299600--Sobic007G158800 Sobic004G299600--Sobic001G242100 Sobic004G066700 Sobic004G066700 Sobic004G299600--Sobic004G066700 Sobic004G299600--Sobic001G261509 Sobic004G299600--Sobic006G277500 Sobic010G128400 Sobic010G128400 Sobic003G400900--Sobic010G128400 Sobic001G319300 Sobic001G319300 Sobic003G400900--Sobic001G319300 Sobic003G400900--Sobic001G502000 Sobic003G400900--Sobic001G229000 Sobic003G400900--Sobic001G242100 Sobic003G400900--Sobic005G222500 Sobic003G400900--Sobic004G299600 Sobic003G400900--Sobic007G158800 Sobic007G085500 Sobic007G085500 Sobic003G400900--Sobic007G085500 Sobic001G242100--Sobic002G301900 Sobic010G045500 Sobic010G045500 Sobic001G242100--Sobic010G045500 Sobic006G079300 Sobic006G079300 Sobic001G242100--Sobic006G079300 Sobic001G242100--Sobic003G400900 Sobic001G242100--Sobic005G222500 Sobic001G242100--Sobic001G502000 Sobic001G232700 Sobic001G232700 Sobic001G242100--Sobic001G232700 Sobic004G322800 Sobic004G322800 Sobic001G242100--Sobic004G322800 Sobic005G160700 Sobic005G160700 Sobic001G242100--Sobic005G160700 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic002G301900--Sobic003G400900 Sobic002G301900--Sobic005G222500 Sobic002G301900--Sobic004G299600 Sobic002G301900--Sobic002G183700 Sobic004G180700 Sobic004G180700 Sobic002G301900--Sobic004G180700 Sobic003G282200 Sobic003G282200 Sobic009G065800--Sobic003G282200 Sobic008G034900 Sobic008G034900 Sobic009G065800--Sobic008G034900 Sobic009G065800--Sobic007G086300 Sobic003G319400 Sobic003G319400 Sobic009G065800--Sobic003G319400 Sobic001G438200 Sobic001G438200 Sobic009G065800--Sobic001G438200 Sobic002G118801 Sobic002G118801 Sobic009G065800--Sobic002G118801 Sobic009G065800--Sobic006G079300 Sobic009G065800--Sobic010G128400 Sobic004G029400 Sobic004G029400 Sobic009G065800--Sobic004G029400 Sobic007G158600--Sobic001G438200 Sobic007G158600--Sobic008G019800 Sobic007G158600--Sobic003G319400 Sobic007G158600--Sobic003G282200 Sobic005G202300 Sobic005G202300 Sobic007G158600--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic007G158600--Sobic001G058300 Sobic007G158600--Sobic005G222500 Sobic007G158600--Sobic005G160700 Sobic007G158600--Sobic002G183700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.