Gene annotation
Transcriptome id Sobic.001G261509.1
Synonym -
Functional annotation -
UniProt C6JRU4
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF163
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G60660 : plasma membrane intrinsic protein 2;4
RAP-DB (Rice) LOC_Os07g26660.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a045837 , Zm00025a021083 , Zm00025a032042 , Zm00025a032750 , Zm00025a013554 , Zm00025a017913
Brachypodium KQJ83644 , KQK01461 , KQK01462 , KQK11942 , KQK16443 , KQK16441
Barley HORVU5Hr1G029550.1 , HORVU5Hr1G029550.2 , HORVU5Hr1G029550.3 , HORVU5Hr1G029550.4 , HORVU5Hr1G029550.5 , HORVU5Hr1G029550.6 , HORVU5Hr1G029550.7 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU5Hr1G027240.3 , HORVU5Hr1G027240.1 , HORVU0Hr1G011280.6 , HORVU0Hr1G011280.4 , HORVU0Hr1G011280.5 , HORVU0Hr1G011280.2 , HORVU0Hr1G011280.3 , HORVU0Hr1G011280.1 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.2 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089970.3 , HORVU2Hr1G089970.2 , HORVU2Hr1G089970.1 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.8 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.1 , HORVU6Hr1G092960.12 , HORVU6Hr1G092960.13 , HORVU6Hr1G092960.10 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU0Hr1G014490.4 , HORVU0Hr1G014490.5 , HORVU0Hr1G014490.6 , HORVU0Hr1G014490.7 , HORVU0Hr1G014490.1 , HORVU0Hr1G014490.2 , HORVU0Hr1G014490.3 , HORVU6Hr1G092960.4 , HORVU6Hr1G092960.5 , HORVU6Hr1G092960.6 , HORVU6Hr1G092960.7 , HORVU6Hr1G092960.1 , HORVU6Hr1G092960.9 , HORVU6Hr1G092970.3 , HORVU6Hr1G092970.2 , HORVU6Hr1G092970.4 , HORVU6Hr1G014300.2 , HORVU6Hr1G014300.1
Wheat TraesCS2D02G376100 , TraesCS5D02G185400 , TraesCS6D02G389400 , TraesCS5B02G178700 , TraesCS6A02G405700 , TraesCS6B02G450000 , TraesCS5D02G112500 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS6B02G450200 , TraesCS6A02G405600 , TraesCS6D02G389500 , TraesCS2A02G379800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
2 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
3 Sobic.007G158800 patatin, putative, expressed -
4 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
5 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
6 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
7 Sobic.006G277500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
9 Sobic.008G068300 transferase family protein, putative, expressed -
10 Sobic.002G385500 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
11 Sobic.008G019800 - -
12 Sobic.010G147200 aluminum-activated malate transporter, putative, expressed -
13 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.004G299600 - -
15 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
17 Sobic.001G187300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
18 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
19 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
20 Sobic.001G438200 expressed protein -


Gene co-expression network
sample Sobic001G261509 Sobic001G261509 Sobic001G502000 Sobic001G502000 Sobic001G261509--Sobic001G502000 Sobic005G222500 Sobic005G222500 Sobic001G261509--Sobic005G222500 Sobic007G158800 Sobic007G158800 Sobic001G261509--Sobic007G158800 Sobic006G089000 Sobic006G089000 Sobic001G261509--Sobic006G089000 Sobic002G183700 Sobic002G183700 Sobic001G261509--Sobic002G183700 Sobic004G029100 Sobic004G029100 Sobic001G261509--Sobic004G029100 Sobic006G277500 Sobic006G277500 Sobic001G261509--Sobic006G277500 Sobic007G158600 Sobic007G158600 Sobic001G261509--Sobic007G158600 Sobic008G068300 Sobic008G068300 Sobic001G261509--Sobic008G068300 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic001G502000--Sobic006G089000 Sobic001G502000--Sobic002G183700 Sobic001G229000 Sobic001G229000 Sobic001G502000--Sobic001G229000 Sobic001G502000--Sobic001G261509 Sobic001G502000--Sobic004G029100 Sobic003G400900 Sobic003G400900 Sobic001G502000--Sobic003G400900 Sobic008G019800 Sobic008G019800 Sobic001G502000--Sobic008G019800 Sobic005G222500--Sobic001G502000 Sobic005G222500--Sobic007G158800 Sobic005G222500--Sobic001G261509 Sobic004G299600 Sobic004G299600 Sobic005G222500--Sobic004G299600 Sobic005G222500--Sobic003G400900 Sobic001G242100 Sobic001G242100 Sobic005G222500--Sobic001G242100 Sobic002G301900 Sobic002G301900 Sobic005G222500--Sobic002G301900 Sobic009G065800 Sobic009G065800 Sobic005G222500--Sobic009G065800 Sobic005G222500--Sobic007G158600 Sobic007G158800--Sobic001G502000 Sobic007G158800--Sobic001G229000 Sobic007G158800--Sobic002G183700 Sobic007G158800--Sobic006G089000 Sobic007G158800--Sobic005G222500 Sobic007G158800--Sobic004G029100 Sobic003G000100 Sobic003G000100 Sobic007G158800--Sobic003G000100 Sobic006G003100 Sobic006G003100 Sobic007G158800--Sobic006G003100 Sobic007G086300 Sobic007G086300 Sobic007G158800--Sobic007G086300 Sobic006G089000--Sobic007G158800 Sobic006G089000--Sobic001G502000 Sobic006G089000--Sobic002G183700 Sobic001G379400 Sobic001G379400 Sobic006G089000--Sobic001G379400 Sobic006G089000--Sobic001G261509 Sobic004G297900 Sobic004G297900 Sobic006G089000--Sobic004G297900 Sobic006G089000--Sobic001G229000 Sobic004G322100 Sobic004G322100 Sobic006G089000--Sobic004G322100 Sobic001G238300 Sobic001G238300 Sobic006G089000--Sobic001G238300 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic003G140700 Sobic003G140700 Sobic002G183700--Sobic003G140700 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800 Sobic004G029100--Sobic004G322100 Sobic004G029100--Sobic002G183700 Sobic010G152400 Sobic010G152400 Sobic004G029100--Sobic010G152400 Sobic004G029100--Sobic007G158800 Sobic004G029100--Sobic003G000100 Sobic007G008600 Sobic007G008600 Sobic004G029100--Sobic007G008600 Sobic004G029100--Sobic001G502000 Sobic003G182200 Sobic003G182200 Sobic004G029100--Sobic003G182200 Sobic004G029100--Sobic008G019800 Sobic006G277800 Sobic006G277800 Sobic006G277500--Sobic006G277800 Sobic006G277500--Sobic001G261509 Sobic006G277500--Sobic008G068300 Sobic006G277500--Sobic004G299600 Sobic005G110406 Sobic005G110406 Sobic006G277500--Sobic005G110406 Sobic007G090460 Sobic007G090460 Sobic006G277500--Sobic007G090460 Sobic006G277500--Sobic005G222500 Sobic006G277500--Sobic001G502000 Sobic006G277500--Sobic002G183700 Sobic001G438200 Sobic001G438200 Sobic007G158600--Sobic001G438200 Sobic007G158600--Sobic008G019800 Sobic003G319400 Sobic003G319400 Sobic007G158600--Sobic003G319400 Sobic003G282200 Sobic003G282200 Sobic007G158600--Sobic003G282200 Sobic005G202300 Sobic005G202300 Sobic007G158600--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic007G158600--Sobic001G058300 Sobic007G158600--Sobic005G222500 Sobic005G160700 Sobic005G160700 Sobic007G158600--Sobic005G160700 Sobic007G158600--Sobic002G183700 Sobic008G068300--Sobic004G029100 Sobic002G385500 Sobic002G385500 Sobic008G068300--Sobic002G385500 Sobic008G068300--Sobic001G502000 Sobic008G068300--Sobic001G261509 Sobic008G068300--Sobic006G089000 Sobic008G068300--Sobic007G158800 Sobic008G068300--Sobic002G183700 Sobic008G068300--Sobic006G277500 Sobic008G068300--Sobic010G152400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.