Gene annotation
Transcriptome id Sobic.006G277500.1
Synonym Sb06g033840
Functional annotation peroxidase precursor, putative, expressed
UniProt C5YB22
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF79
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G71695 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os04g59150.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010520 , Zm00025a010525 , Zm00025a010524 , Zm00025a057483 , Zm00025a010519 , Zm00025a010517
Brachypodium PNT64332 , KQJ85462 , KQJ85452 , KQJ85478 , KQK18352
Barley HORVU2Hr1G124930.1 , HORVU2Hr1G124930.3 , HORVU2Hr1G124930.2 , HORVU2Hr1G125110.1 , HORVU2Hr1G124980.4 , HORVU2Hr1G124980.5 , HORVU2Hr1G124980.2 , HORVU2Hr1G125090.1 , HORVU4Hr1G090540.1 , HORVU2Hr1G124970.1 , HORVU2Hr1G124970.3 , HORVU2Hr1G124970.2 , HORVU2Hr1G124960.4 , HORVU2Hr1G124960.2 , HORVU2Hr1G124960.3 , HORVU2Hr1G124960.1 , HORVU2Hr1G125110.2 , HORVU2Hr1G125110.3 , HORVU2Hr1G125110.4 , HORVU2Hr1G125110.6 , HORVU2Hr1G125110.7
Wheat TraesCS2A02G573700 , TraesCS2A02G574400 , TraesCS7D02G234300 , TraesCS7A02G234000 , TraesCS2B02G615100 , TraesCS2B02G613500 , TraesCS3D02G419900 , TraesCS3B02G461300 , TraesCS2D02G584600 , TraesCS2B02G613400 , TraesCS2A02G573500 , TraesCS2B02G614400 , TraesCS2B02G614100 , TraesCS2B02G614500 , TraesCS2B02G614000 , TraesCS2D02G583700 , TraesCS2D02G584700 , TraesCS2A02G573400 , TraesCS7B02G132400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G261509 - K09872: aquaporin PIP
3 Sobic.008G068300 transferase family protein, putative, expressed -
4 Sobic.004G299600 - -
5 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
6 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
7 Sobic.005G222500 phospholipase D, putative, expressed K01115: phospholipase D1/2
8 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
9 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
10 Sobic.007G094300 tetraspanin family protein, putative, expressed -
11 Sobic.010G135100 expressed protein -
12 Sobic.004G029100 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
13 Sobic.009G052800 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.007G158800 patatin, putative, expressed -
15 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
16 Sobic.005G180500 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.006G235200 expressed protein -
18 Sobic.008G077550 - -
19 Sobic.001G434800 MYB-like transcription factor DIVARICATA, putative, expressed -
20 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -


Gene co-expression network
sample Sobic006G277500 Sobic006G277500 Sobic006G277800 Sobic006G277800 Sobic006G277500--Sobic006G277800 Sobic001G261509 Sobic001G261509 Sobic006G277500--Sobic001G261509 Sobic008G068300 Sobic008G068300 Sobic006G277500--Sobic008G068300 Sobic004G299600 Sobic004G299600 Sobic006G277500--Sobic004G299600 Sobic005G110406 Sobic005G110406 Sobic006G277500--Sobic005G110406 Sobic007G090460 Sobic007G090460 Sobic006G277500--Sobic007G090460 Sobic005G222500 Sobic005G222500 Sobic006G277500--Sobic005G222500 Sobic001G502000 Sobic001G502000 Sobic006G277500--Sobic001G502000 Sobic002G183700 Sobic002G183700 Sobic006G277500--Sobic002G183700 Sobic006G277800--Sobic006G277500 Sobic006G277800--Sobic005G110406 Sobic006G072201 Sobic006G072201 Sobic006G277800--Sobic006G072201 Sobic007G094300 Sobic007G094300 Sobic006G277800--Sobic007G094300 Sobic010G135100 Sobic010G135100 Sobic006G277800--Sobic010G135100 Sobic002G261300 Sobic002G261300 Sobic006G277800--Sobic002G261300 Sobic006G277800--Sobic008G068300 Sobic008G148200 Sobic008G148200 Sobic006G277800--Sobic008G148200 Sobic008G077550 Sobic008G077550 Sobic006G277800--Sobic008G077550 Sobic001G261509--Sobic001G502000 Sobic001G261509--Sobic005G222500 Sobic007G158800 Sobic007G158800 Sobic001G261509--Sobic007G158800 Sobic006G089000 Sobic006G089000 Sobic001G261509--Sobic006G089000 Sobic001G261509--Sobic002G183700 Sobic004G029100 Sobic004G029100 Sobic001G261509--Sobic004G029100 Sobic001G261509--Sobic006G277500 Sobic007G158600 Sobic007G158600 Sobic001G261509--Sobic007G158600 Sobic001G261509--Sobic008G068300 Sobic008G068300--Sobic004G029100 Sobic002G385500 Sobic002G385500 Sobic008G068300--Sobic002G385500 Sobic008G068300--Sobic001G502000 Sobic008G068300--Sobic001G261509 Sobic008G068300--Sobic006G089000 Sobic008G068300--Sobic007G158800 Sobic008G068300--Sobic002G183700 Sobic008G068300--Sobic006G277500 Sobic010G152400 Sobic010G152400 Sobic008G068300--Sobic010G152400 Sobic004G299600--Sobic005G222500 Sobic004G299600--Sobic001G502000 Sobic003G400900 Sobic003G400900 Sobic004G299600--Sobic003G400900 Sobic002G301900 Sobic002G301900 Sobic004G299600--Sobic002G301900 Sobic004G299600--Sobic007G158800 Sobic001G242100 Sobic001G242100 Sobic004G299600--Sobic001G242100 Sobic004G066700 Sobic004G066700 Sobic004G299600--Sobic004G066700 Sobic004G299600--Sobic001G261509 Sobic004G299600--Sobic006G277500 Sobic005G110406--Sobic010G135100 Sobic005G110406--Sobic006G277800 Sobic005G110406--Sobic007G090460 Sobic005G110406--Sobic007G094300 Sobic004G229400 Sobic004G229400 Sobic005G110406--Sobic004G229400 Sobic005G110406--Sobic006G277500 Sobic009G052800 Sobic009G052800 Sobic005G110406--Sobic009G052800 Sobic002G234400 Sobic002G234400 Sobic005G110406--Sobic002G234400 Sobic010G088800 Sobic010G088800 Sobic005G110406--Sobic010G088800 Sobic007G090460--Sobic010G088800 Sobic006G103300 Sobic006G103300 Sobic007G090460--Sobic006G103300 Sobic007G090460--Sobic005G110406 Sobic007G090460--Sobic002G183700 Sobic006G225500 Sobic006G225500 Sobic007G090460--Sobic006G225500 Sobic002G085900 Sobic002G085900 Sobic007G090460--Sobic002G085900 Sobic006G172500 Sobic006G172500 Sobic007G090460--Sobic006G172500 Sobic004G110700 Sobic004G110700 Sobic007G090460--Sobic004G110700 Sobic007G090460--Sobic004G029100 Sobic005G222500--Sobic001G502000 Sobic005G222500--Sobic007G158800 Sobic005G222500--Sobic001G261509 Sobic005G222500--Sobic004G299600 Sobic005G222500--Sobic003G400900 Sobic005G222500--Sobic001G242100 Sobic005G222500--Sobic002G301900 Sobic009G065800 Sobic009G065800 Sobic005G222500--Sobic009G065800 Sobic005G222500--Sobic007G158600 Sobic001G502000--Sobic007G158800 Sobic001G502000--Sobic005G222500 Sobic001G502000--Sobic006G089000 Sobic001G502000--Sobic002G183700 Sobic001G229000 Sobic001G229000 Sobic001G502000--Sobic001G229000 Sobic001G502000--Sobic001G261509 Sobic001G502000--Sobic004G029100 Sobic001G502000--Sobic003G400900 Sobic008G019800 Sobic008G019800 Sobic001G502000--Sobic008G019800 Sobic002G183700--Sobic007G158800 Sobic002G183700--Sobic004G029100 Sobic002G183700--Sobic001G502000 Sobic003G140700 Sobic003G140700 Sobic002G183700--Sobic003G140700 Sobic002G183700--Sobic006G089000 Sobic006G274933 Sobic006G274933 Sobic002G183700--Sobic006G274933 Sobic002G183700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic002G183700--Sobic004G322100 Sobic003G311800 Sobic003G311800 Sobic002G183700--Sobic003G311800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.