Gene annotation
Transcriptome id Sobic.003G411200.1
Synonym Sb03g044560
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5XGZ4
Pfam PF13716 PF03765
Panther DB PTHR10174 PTHR10174:SF140
NCBI CDD KOG1471; Phosphatidylinositol transfer protein SEC14 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01630 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os01g70210.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026202 , Zm00025a026201 , Zm00025a023026
Brachypodium KQK11316
Barley HORVU3Hr1G096280.5 , HORVU3Hr1G096280.6 , HORVU3Hr1G096280.7 , HORVU3Hr1G096280.3 , HORVU5Hr1G121860.3 , HORVU5Hr1G121860.2 , HORVU5Hr1G121860.1 , HORVU5Hr1G121860.5 , HORVU5Hr1G121860.4 , HORVU3Hr1G096290.8 , HORVU3Hr1G096290.3 , HORVU3Hr1G096290.2 , HORVU3Hr1G096290.1 , HORVU3Hr1G096290.7 , HORVU3Hr1G096290.6 , HORVU3Hr1G096290.5 , HORVU3Hr1G096290.4 , HORVU3Hr1G096280.4 , HORVU3Hr1G096280.1 , HORVU3Hr1G096280.2
Wheat TraesCS3A02G441100 , TraesCS3A02G441100 , TraesCS3A02G441000 , TraesCS3B02G475100 , TraesCS5D02G538300 , TraesCS4A02G333800 , TraesCS5B02G551900 , TraesCS3A02G440900 , TraesCS3D02G433800 , TraesCS3B02G475000 , TraesCS3D02G433700
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
2 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.001G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.009G109000 expressed protein -
5 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
6 Sobic.001G300500 expansin precursor, putative, expressed -
7 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
8 Sobic.001G430100 - -
9 Sobic.006G235200 expressed protein -
10 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
11 Sobic.006G274933 - -
12 Sobic.003G360600 cytochrome P450, putative, expressed K15401: long-chain fatty acid omega-monooxygenase
13 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
14 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.003G039600 expressed protein -
16 Sobic.008G009400 - -
17 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
18 Sobic.001G395800 SMP-30/Gluconolaconase/LRE domain protein, putative, expressed -
19 Sobic.005G067500 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
20 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G411200 Sobic003G411200 Sobic003G311800 Sobic003G311800 Sobic003G411200--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic003G411200--Sobic004G297900 Sobic001G238800 Sobic001G238800 Sobic003G411200--Sobic001G238800 Sobic009G109000 Sobic009G109000 Sobic003G411200--Sobic009G109000 Sobic002G183700 Sobic002G183700 Sobic003G411200--Sobic002G183700 Sobic001G300500 Sobic001G300500 Sobic003G411200--Sobic001G300500 Sobic001G049900 Sobic001G049900 Sobic003G411200--Sobic001G049900 Sobic001G430100 Sobic001G430100 Sobic003G411200--Sobic001G430100 Sobic006G235200 Sobic006G235200 Sobic003G411200--Sobic006G235200 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic009G106400 Sobic009G106400 Sobic001G238800--Sobic009G106400 Sobic010G106500 Sobic010G106500 Sobic001G238800--Sobic010G106500 Sobic003G360600 Sobic003G360600 Sobic001G238800--Sobic003G360600 Sobic001G238800--Sobic003G411200 Sobic010G271300 Sobic010G271300 Sobic001G238800--Sobic010G271300 Sobic001G238800--Sobic003G311800 Sobic001G238800--Sobic009G109000 Sobic005G067500 Sobic005G067500 Sobic001G238800--Sobic005G067500 Sobic003G427800 Sobic003G427800 Sobic001G238800--Sobic003G427800 Sobic009G109000--Sobic003G311800 Sobic009G109000--Sobic004G297900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic009G109000--Sobic001G430100 Sobic007G158800 Sobic007G158800 Sobic002G183700--Sobic007G158800 Sobic004G029100 Sobic004G029100 Sobic002G183700--Sobic004G029100 Sobic001G502000 Sobic001G502000 Sobic002G183700--Sobic001G502000 Sobic003G140700 Sobic003G140700 Sobic002G183700--Sobic003G140700 Sobic006G089000 Sobic006G089000 Sobic002G183700--Sobic006G089000 Sobic002G183700--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic002G183700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic002G183700--Sobic004G322100 Sobic002G183700--Sobic003G311800 Sobic001G300500--Sobic004G297900 Sobic001G300500--Sobic003G311800 Sobic001G300500--Sobic004G295100 Sobic001G300500--Sobic007G090469 Sobic006G172550 Sobic006G172550 Sobic001G300500--Sobic006G172550 Sobic001G300500--Sobic006G235200 Sobic001G300500--Sobic001G238300 Sobic006G172601 Sobic006G172601 Sobic001G300500--Sobic006G172601 Sobic001G300500--SobicK026900 Sobic001G049900--Sobic003G311800 Sobic001G049900--Sobic002G003800 Sobic010G184800 Sobic010G184800 Sobic001G049900--Sobic010G184800 Sobic001G049900--Sobic009G109000 Sobic001G049900--Sobic001G430100 Sobic001G049900--Sobic006G197100 Sobic001G049900--Sobic008G055100 Sobic001G049900--Sobic004G042000 Sobic004G310200 Sobic004G310200 Sobic001G049900--Sobic004G310200 Sobic001G430100--Sobic002G183700 Sobic001G430100--Sobic003G311800 Sobic007G050200 Sobic007G050200 Sobic001G430100--Sobic007G050200 Sobic001G430100--Sobic001G049900 Sobic002G001700 Sobic002G001700 Sobic001G430100--Sobic002G001700 Sobic001G430100--Sobic004G348800 Sobic001G430100--Sobic004G297900 Sobic001G430100--Sobic006G197100 Sobic001G430100--Sobic009G109000 Sobic006G235200--Sobic004G297900 Sobic006G235200--Sobic004G295100 Sobic006G235200--Sobic008G009400 Sobic006G235200--Sobic001G300500 Sobic006G235200--Sobic003G311800 Sobic003G299300 Sobic003G299300 Sobic006G235200--Sobic003G299300 Sobic006G235200--Sobic006G172550 Sobic006G235200--Sobic002G183700 Sobic002G092600 Sobic002G092600 Sobic006G235200--Sobic002G092600
Octagon: transcription factors


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