Gene annotation
Transcriptome id Sobic.003G039600.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VVL2
Pfam -
Panther DB PTHR33120 PTHR33120:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g08860.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G002400 polygalacturonase inhibitor precursor, putative, expressed -
2 Sobic.006G274933 - -
3 Sobic.007G149800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
5 Sobic.001G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
7 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
8 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
9 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
10 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
11 Sobic.003G360600 cytochrome P450, putative, expressed K15401: long-chain fatty acid omega-monooxygenase
12 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
13 Sobic.004G171700 U-box domain-containing protein, putative, expressed -
14 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
15 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G048400 citrate-binding protein precursor, putative, expressed -
17 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
18 Sobic.002G361200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
19 Sobic.001G318000 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G039600 Sobic003G039600 Sobic009G002400 Sobic009G002400 Sobic003G039600--Sobic009G002400 Sobic006G274933 Sobic006G274933 Sobic003G039600--Sobic006G274933 Sobic007G149800 Sobic007G149800 Sobic003G039600--Sobic007G149800 Sobic003G411200 Sobic003G411200 Sobic003G039600--Sobic003G411200 Sobic001G238800 Sobic001G238800 Sobic003G039600--Sobic001G238800 Sobic009G106400 Sobic009G106400 Sobic003G039600--Sobic009G106400 Sobic007G090460 Sobic007G090460 Sobic003G039600--Sobic007G090460 Sobic007G218800 Sobic007G218800 Sobic003G039600--Sobic007G218800 Sobic010G088800 Sobic010G088800 Sobic003G039600--Sobic010G088800 Sobic009G002400--Sobic003G039600 Sobic009G002400--Sobic006G274933 Sobic010G071400 Sobic010G071400 Sobic009G002400--Sobic010G071400 Sobic009G002400--Sobic001G238800 Sobic003G119500 Sobic003G119500 Sobic009G002400--Sobic003G119500 Sobic004G159733 Sobic004G159733 Sobic009G002400--Sobic004G159733 Sobic009G002400--Sobic003G411200 Sobic003G311800 Sobic003G311800 Sobic009G002400--Sobic003G311800 Sobic001G532200 Sobic001G532200 Sobic009G002400--Sobic001G532200 Sobic002G183700 Sobic002G183700 Sobic006G274933--Sobic002G183700 Sobic006G274933--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic006G274933--Sobic003G269600 Sobic003G140700 Sobic003G140700 Sobic006G274933--Sobic003G140700 Sobic002G361200 Sobic002G361200 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G225500 Sobic006G225500 Sobic006G274933--Sobic006G225500 Sobic003G121100 Sobic003G121100 Sobic006G274933--Sobic003G121100 Sobic007G149800--Sobic003G039600 Sobic010G135100 Sobic010G135100 Sobic007G149800--Sobic010G135100 Sobic005G110406 Sobic005G110406 Sobic007G149800--Sobic005G110406 Sobic004G171700 Sobic004G171700 Sobic007G149800--Sobic004G171700 Sobic004G229400 Sobic004G229400 Sobic007G149800--Sobic004G229400 Sobic007G149800--Sobic007G090460 Sobic007G149800--Sobic003G411200 Sobic008G077550 Sobic008G077550 Sobic007G149800--Sobic008G077550 Sobic007G149900 Sobic007G149900 Sobic007G149800--Sobic007G149900 Sobic003G411200--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic003G411200--Sobic004G297900 Sobic003G411200--Sobic001G238800 Sobic009G109000 Sobic009G109000 Sobic003G411200--Sobic009G109000 Sobic003G411200--Sobic002G183700 Sobic001G300500 Sobic001G300500 Sobic003G411200--Sobic001G300500 Sobic001G049900 Sobic001G049900 Sobic003G411200--Sobic001G049900 Sobic001G430100 Sobic001G430100 Sobic003G411200--Sobic001G430100 Sobic006G235200 Sobic006G235200 Sobic003G411200--Sobic006G235200 Sobic001G238800--Sobic009G106400 Sobic010G106500 Sobic010G106500 Sobic001G238800--Sobic010G106500 Sobic003G360600 Sobic003G360600 Sobic001G238800--Sobic003G360600 Sobic001G238800--Sobic003G411200 Sobic010G271300 Sobic010G271300 Sobic001G238800--Sobic010G271300 Sobic001G238800--Sobic003G311800 Sobic001G238800--Sobic009G109000 Sobic005G067500 Sobic005G067500 Sobic001G238800--Sobic005G067500 Sobic003G427800 Sobic003G427800 Sobic001G238800--Sobic003G427800 Sobic009G106400--Sobic001G238800 Sobic009G106400--Sobic003G360600 Sobic009G106400--Sobic010G106500 Sobic007G169900 Sobic007G169900 Sobic009G106400--Sobic007G169900 Sobic004G349125 Sobic004G349125 Sobic009G106400--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic009G106400--Sobic001G416200 Sobic004G318700 Sobic004G318700 Sobic009G106400--Sobic004G318700 Sobic002G416900 Sobic002G416900 Sobic009G106400--Sobic002G416900 Sobic001G161500 Sobic001G161500 Sobic009G106400--Sobic001G161500 Sobic007G090460--Sobic010G088800 Sobic006G103300 Sobic006G103300 Sobic007G090460--Sobic006G103300 Sobic007G090460--Sobic005G110406 Sobic007G090460--Sobic002G183700 Sobic007G090460--Sobic006G225500 Sobic002G085900 Sobic002G085900 Sobic007G090460--Sobic002G085900 Sobic006G172500 Sobic006G172500 Sobic007G090460--Sobic006G172500 Sobic004G110700 Sobic004G110700 Sobic007G090460--Sobic004G110700 Sobic004G029100 Sobic004G029100 Sobic007G090460--Sobic004G029100 Sobic008G055100 Sobic008G055100 Sobic007G218800--Sobic008G055100 Sobic002G154600 Sobic002G154600 Sobic007G218800--Sobic002G154600 Sobic007G176000 Sobic007G176000 Sobic007G218800--Sobic007G176000 Sobic010G252500 Sobic010G252500 Sobic007G218800--Sobic010G252500 Sobic009G088900 Sobic009G088900 Sobic007G218800--Sobic009G088900 Sobic007G218800--Sobic003G311800 Sobic007G218800--Sobic001G430100 Sobic007G218800--Sobic001G049900 Sobic010G085800 Sobic010G085800 Sobic007G218800--Sobic010G085800 Sobic010G088800--Sobic007G090460 Sobic003G140600 Sobic003G140600 Sobic010G088800--Sobic003G140600 Sobic010G088800--Sobic006G103300 Sobic010G088800--Sobic006G172500 Sobic006G172550 Sobic006G172550 Sobic010G088800--Sobic006G172550 Sobic010G088800--Sobic006G225500 Sobic005G166700 Sobic005G166700 Sobic010G088800--Sobic005G166700 Sobic010G088800--Sobic002G085900 Sobic007G008600 Sobic007G008600 Sobic010G088800--Sobic007G008600
Octagon: transcription factors


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