Gene annotation
| Transcriptome id | Sobic.010G106500.2,Sobic.010G106500.1 |
|---|---|
| Synonym | Sb10g009310 |
| Functional annotation | GDSL-like lipase/acylhydrolase, putative, expressed |
| UniProt | A0A1W0VSC6 , C5Z813 |
| Pfam | PF00657 |
| Panther DB | PTHR22835 PTHR22835:SF278 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016788; hydrolase activity, acting on ester bonds |
Orthologs (automatic annotation)
| TAIR | AT5G37690 : SGNH hydrolase-type esterase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g14630.1 : GDSL-like lipase/acylhydrolase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a032662 , Zm00025a050376 , Zm00025a042710 |
| Brachypodium | KQK01589 , KQK18689 |
| Barley | HORVU6Hr1G073530.4 , HORVU6Hr1G073530.2 , HORVU6Hr1G073530.3 , HORVU6Hr1G073530.1 , HORVU7Hr1G041690.8 , HORVU7Hr1G041690.3 , HORVU7Hr1G041690.2 , HORVU7Hr1G041690.1 , HORVU7Hr1G041690.7 , HORVU7Hr1G041690.6 , HORVU7Hr1G041690.5 , HORVU7Hr1G041690.4 |
| Wheat | TraesCS6D02G275400 , TraesCS7B02G112100 , TraesCS7A02G204900 , TraesCS7D02G207900 , TraesCS6A02G294300 , TraesCS6A02G294800 , TraesCS6A02G294800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G360600 | cytochrome P450, putative, expressed | K15401: long-chain fatty acid omega-monooxygenase |
| 2 | Sobic.010G271200 | expressed protein | - |
| 3 | Sobic.001G238800 | GDSL-like lipase/acylhydrolase, putative, expressed | - |
| 4 | Sobic.009G106400 | GCRP10 - Glycine and cysteine rich family protein precursor, expressed | - |
| 5 | Sobic.002G416900 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 6 | Sobic.003G269600 | "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
| 7 | Sobic.001G318000 | glutathione S-transferase GSTU6, putative, expressed | K00799: GST, glutathione S-transferase |
| 8 | Sobic.001G264000 | dehydrogenase, putative, expressed | K00001: E1.1.1.1, alcohol dehydrogenase |
| 9 | Sobic.003G093700 | expressed protein | - |
| 10 | Sobic.003G269500 | "CYP711A family, the cytochrome P450 homepage. Its recombinant protein did not converted CLA to 5DS or 5DS to hydroxylated 5DS."(PubMedID : 33793911)@SbMAX1a (cytochrome P450 711A enzyme in sorghum) synthesized 18-hydroxy-carlactonoic acid (18-hydroxy-CLA) directly from carlactone (CL)(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
| 11 | Sobic.004G349125 | - | - |
| 12 | Sobic.010G067400 | receptor-like protein kinase precursor, putative, expressed | - |
| 13 | Sobic.010G271300 | carrier, putative, expressed | - |
| 14 | Sobic.003G311800 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed | - |
| 15 | Sobic.001G508532 | - | - |
| 16 | Sobic.004G348800 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed | - |
| 17 | Sobic.001G395800 | SMP-30/Gluconolaconase/LRE domain protein, putative, expressed | - |
| 18 | Sobic.002G365600 | igA FC receptor precursor, putative, expressed | - |
| 19 | Sobic.009G109000 | expressed protein | - |
| 20 | Sobic.004G318700 | OsSub22 - Putative Subtilisin homologue, expressed | - |
Gene co-expression network
Octagon: transcription factors
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