Gene annotation
Transcriptome id Sobic.001G395800.1
Synonym Sb01g037470
Functional annotation SMP-30/Gluconolaconase/LRE domain protein, putative, expressed
UniProt C5WMG9
Pfam -
Panther DB PTHR31460 PTHR31460:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16760 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os03g19452.1 : SMP-30/Gluconolaconase/LRE domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a052558 , Zm00025a002137
Brachypodium -
Barley -
Wheat TraesCS4A02G121100 , TraesCS4D02G184800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
2 Sobic.010G212500 - -
3 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
4 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
8 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
9 Sobic.006G197100 DNA binding protein, putative, expressed -
10 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
11 Sobic.002G261500 AIR12, putative, expressed -
12 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
13 Sobic.007G090469 - -
14 Sobic.001G238300 expansin precursor, putative, expressed -
15 Sobic.004G349125 - -
16 Sobic.006G274933 - -
17 Sobic.009G035300 expressed protein -
18 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
19 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G395800 Sobic001G395800 Sobic003G311800 Sobic003G311800 Sobic001G395800--Sobic003G311800 Sobic010G212500 Sobic010G212500 Sobic001G395800--Sobic010G212500 Sobic004G042000 Sobic004G042000 Sobic001G395800--Sobic004G042000 Sobic003G399600 Sobic003G399600 Sobic001G395800--Sobic003G399600 Sobic004G297900 Sobic004G297900 Sobic001G395800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic001G395800--Sobic002G003800 Sobic001G264000 Sobic001G264000 Sobic001G395800--Sobic001G264000 Sobic003G269600 Sobic003G269600 Sobic001G395800--Sobic003G269600 Sobic006G197100 Sobic006G197100 Sobic001G395800--Sobic006G197100 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic009G109000 Sobic009G109000 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000 Sobic002G261500 Sobic002G261500 Sobic010G212500--Sobic002G261500 Sobic004G348800 Sobic004G348800 Sobic010G212500--Sobic004G348800 Sobic002G365801 Sobic002G365801 Sobic010G212500--Sobic002G365801 Sobic002G365550 Sobic002G365550 Sobic010G212500--Sobic002G365550 Sobic010G212500--Sobic001G395800 Sobic003G119500 Sobic003G119500 Sobic010G212500--Sobic003G119500 Sobic003G053400 Sobic003G053400 Sobic010G212500--Sobic003G053400 Sobic010G212500--Sobic003G311800 Sobic010G212500--Sobic009G109000 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic001G302600 Sobic001G302600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic006G225500 Sobic006G225500 Sobic003G399600--Sobic006G225500 Sobic003G399600--Sobic003G269600 Sobic002G326500 Sobic002G326500 Sobic003G399600--Sobic002G326500 Sobic003G140700 Sobic003G140700 Sobic003G399600--Sobic003G140700 Sobic006G172500 Sobic006G172500 Sobic003G399600--Sobic006G172500 Sobic003G399600--Sobic001G304201 Sobic004G110700 Sobic004G110700 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic006G150100 Sobic006G150100 Sobic003G399600--Sobic006G150100 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic001G304100 Sobic001G304100 Sobic002G003800--Sobic001G304100 Sobic001G264000--Sobic006G197100 Sobic001G264000--Sobic004G348800 Sobic001G264000--Sobic004G042000 Sobic002G185800 Sobic002G185800 Sobic001G264000--Sobic002G185800 Sobic009G035300 Sobic009G035300 Sobic001G264000--Sobic009G035300 Sobic006G256900 Sobic006G256900 Sobic001G264000--Sobic006G256900 Sobic004G249000 Sobic004G249000 Sobic001G264000--Sobic004G249000 Sobic001G264000--Sobic003G269600 Sobic001G264000--Sobic002G003800 Sobic003G269600--Sobic004G110700 Sobic003G269600--Sobic003G399600 Sobic003G269600--Sobic006G274933 Sobic003G269600--Sobic006G150100 Sobic003G269600--Sobic002G183700 Sobic010G106500 Sobic010G106500 Sobic003G269600--Sobic010G106500 Sobic003G121100 Sobic003G121100 Sobic003G269600--Sobic003G121100 Sobic003G269600--Sobic003G140700 Sobic006G170600 Sobic006G170600 Sobic003G269600--Sobic006G170600 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic004G202400 Sobic004G202400 Sobic006G197100--Sobic004G202400 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600
Octagon: transcription factors


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