Gene annotation
Transcriptome id Sobic.001G416200.1
Synonym RHL41, Sb01g039190, ZAT12
Functional annotation Responsive to hight light 41 (PubMedID : 26320239)
ZOS3-09 - C2H2 zinc finger protein, expressed
UniProt C5WPB8
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF162
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59820 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os03g17150.1 : ZOS3-09 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a039697 , Zm00025a026940 , Zm00025a001885
Brachypodium KQK22299 , PNT60482 , KQK10499 , KQJ81406
Barley HORVU5Hr1G045760.1 , HORVU5Hr1G045760.2 , HORVU1Hr1G006910.2 , HORVU1Hr1G006910.1 , HORVU4Hr1G058690.1 , HORVU4Hr1G058720.1 , HORVU5Hr1G112930.4 , HORVU5Hr1G112930.2 , HORVU5Hr1G113080.1 , HORVU5Hr1G112970.2 , HORVU5Hr1G112970.1 , HORVU5Hr1G113090.1 , HORVU5Hr1G113120.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G349125 - -
2 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.006G197100 DNA binding protein, putative, expressed -
5 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
6 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
7 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
8 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.009G035300 expressed protein -
12 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.001G237900 expansin precursor, putative, expressed -
14 Sobic.007G090469 - -
15 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
16 Sobic.001G063200 VQ domain containing protein, putative, expressed -
17 Sobic.007G169900 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
18 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G238400 expansin precursor, putative, expressed -
20 Sobic.001G238300 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G416200 Sobic001G416200 Sobic004G349125 Sobic004G349125 Sobic001G416200--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G416200--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic001G416200--Sobic001G161500 Sobic006G197100 Sobic006G197100 Sobic001G416200--Sobic006G197100 Sobic004G042000 Sobic004G042000 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic004G202400 Sobic004G202400 Sobic001G416200--Sobic004G202400 Sobic002G003800 Sobic002G003800 Sobic001G416200--Sobic002G003800 Sobic001G304100 Sobic001G304100 Sobic001G416200--Sobic001G304100 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic003G311800 Sobic003G311800 Sobic004G349125--Sobic003G311800 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G304201 Sobic001G304201 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic001G161500--Sobic001G416200 Sobic001G161500--Sobic004G349125 Sobic001G161500--Sobic001G302600 Sobic001G161500--Sobic004G318700 Sobic001G161500--Sobic001G304100 Sobic001G161500--Sobic004G042000 Sobic009G035300 Sobic009G035300 Sobic001G161500--Sobic009G035300 Sobic002G213600 Sobic002G213600 Sobic001G161500--Sobic002G213600 Sobic001G161500--Sobic006G197100 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic002G042200 Sobic002G042200 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic004G318700--Sobic001G416200 Sobic001G238400 Sobic001G238400 Sobic004G318700--Sobic001G238400 Sobic004G318700--Sobic001G304100 Sobic004G318700--Sobic001G161500 Sobic004G318700--Sobic002G213600 Sobic009G188000 Sobic009G188000 Sobic004G318700--Sobic009G188000 Sobic001G237900 Sobic001G237900 Sobic004G318700--Sobic001G237900 Sobic004G318700--Sobic004G349125 Sobic004G318700--Sobic004G202400 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic004G202400--Sobic003G311800 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800
Octagon: transcription factors


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