Gene annotation
Transcriptome id Sobic.001G237900.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, Sb01g021040, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5X0H9
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os10g30340.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000709 , Zm00025a006813 , Zm00025a006809
Brachypodium KQJ96856 , KQK23579
Barley HORVU5Hr1G121370.1 , HORVU4Hr1G072410.1
Wheat TraesCS4B02G271200 , TraesCS4A02G034300 , TraesCS4D02G270400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238400 expansin precursor, putative, expressed -
2 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.002G425000 VQ domain containing protein, putative, expressed -
6 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
7 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.010G063000 - -
9 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.008G127933 - -
11 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
12 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G238300 expansin precursor, putative, expressed -
14 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
15 Sobic.007G204700 expressed protein -
16 Sobic.003G299300 expressed protein -
17 Sobic.003G007600 expressed protein -
18 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.002G124500 expansin precursor, putative, expressed -
20 Sobic.007G090469 - -


Gene co-expression network
sample Sobic001G237900 Sobic001G237900 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic010G158500 Sobic010G158500 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G237900--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic001G237900--Sobic002G425000 Sobic004G202400 Sobic004G202400 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic001G238400--Sobic001G304100 Sobic001G238400--Sobic001G237900 Sobic003G007600 Sobic003G007600 Sobic001G238400--Sobic003G007600 Sobic009G188000 Sobic009G188000 Sobic001G238400--Sobic009G188000 Sobic004G318700 Sobic004G318700 Sobic001G238400--Sobic004G318700 Sobic003G299300 Sobic003G299300 Sobic001G238400--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G238400--Sobic004G292900 Sobic006G234800 Sobic006G234800 Sobic001G238400--Sobic006G234800 Sobic006G132900 Sobic006G132900 Sobic001G238400--Sobic006G132900 Sobic010G158500--Sobic001G237900 Sobic010G158500--Sobic006G158400 Sobic007G204700 Sobic007G204700 Sobic010G158500--Sobic007G204700 Sobic002G124500 Sobic002G124500 Sobic010G158500--Sobic002G124500 SobicK026900 SobicK026900 Sobic010G158500--SobicK026900 Sobic010G158500--Sobic010G063000 Sobic010G158500--Sobic004G202400 Sobic008G127933 Sobic008G127933 Sobic010G158500--Sobic008G127933 Sobic005G066100 Sobic005G066100 Sobic010G158500--Sobic005G066100 Sobic003G053300--Sobic001G237900 Sobic003G053300--Sobic002G213600 Sobic005G073000 Sobic005G073000 Sobic003G053300--Sobic005G073000 Sobic003G053300--Sobic001G304100 Sobic003G053300--Sobic002G425000 Sobic004G295100 Sobic004G295100 Sobic003G053300--Sobic004G295100 Sobic003G053300--Sobic002G124500 Sobic003G053300--Sobic001G238400 Sobic003G053400 Sobic003G053400 Sobic003G053300--Sobic003G053400 Sobic006G158400--Sobic008G127933 Sobic008G027600 Sobic008G027600 Sobic006G158400--Sobic008G027600 Sobic006G158400--Sobic001G237900 Sobic006G158400--Sobic010G158500 Sobic006G158400--Sobic007G204700 Sobic006G158400--Sobic003G007600 Sobic010G043900 Sobic010G043900 Sobic006G158400--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic006G158400--Sobic001G318500 Sobic006G158400--Sobic003G299300 Sobic001G238300 Sobic001G238300 Sobic002G425000--Sobic001G238300 Sobic002G261500 Sobic002G261500 Sobic002G425000--Sobic002G261500 Sobic002G425000--Sobic008G127933 Sobic002G425000--Sobic001G237900 Sobic006G260200 Sobic006G260200 Sobic002G425000--Sobic006G260200 Sobic004G297900 Sobic004G297900 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic002G425000--Sobic003G053400 Sobic006G122800 Sobic006G122800 Sobic002G425000--Sobic006G122800 Sobic006G197100 Sobic006G197100 Sobic004G202400--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic004G202400--Sobic001G416200 Sobic004G202400--Sobic001G237900 Sobic004G202400--SobicK026900 Sobic003G157600 Sobic003G157600 Sobic004G202400--Sobic003G157600 Sobic004G349125 Sobic004G349125 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic002G042200 Sobic002G042200 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800 Sobic006G125100 Sobic006G125100 Sobic010G063000--Sobic006G125100 Sobic002G125700 Sobic002G125700 Sobic010G063000--Sobic002G125700 Sobic010G063000--Sobic002G213600 Sobic010G063000--Sobic001G237900 Sobic001G503100 Sobic001G503100 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic001G161500 Sobic001G161500 Sobic010G063000--Sobic001G161500 Sobic010G063000--Sobic001G318500 Sobic001G325400 Sobic001G325400 Sobic010G063000--Sobic001G325400 Sobic002G213600--Sobic001G304100 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic002G213600--Sobic004G318700 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201
Octagon: transcription factors


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