Gene annotation
Transcriptome id Sobic.002G425000.2
Synonym Sb02g043570
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1W0W802
Pfam PF05678
Panther DB PTHR33179 PTHR33179:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41010 : calmodulin (CAM)-binding protein of 25 kDa
RAP-DB (Rice) LOC_Os07g48710.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a015478
Brachypodium -
Barley HORVU0Hr1G040410.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238300 expansin precursor, putative, expressed -
2 Sobic.002G261500 AIR12, putative, expressed -
3 Sobic.008G127933 - -
4 Sobic.001G237900 expansin precursor, putative, expressed -
5 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
6 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
10 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.002G124500 expansin precursor, putative, expressed -
12 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
13 Sobic.001G238400 expansin precursor, putative, expressed -
14 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G073000 stress responsive protein, putative, expressed -
16 Sobic.008G009400 - -
17 Sobic.007G090469 - -
18 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G066100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.006G172601 - -


Gene co-expression network
sample Sobic002G425000 Sobic002G425000 Sobic001G238300 Sobic001G238300 Sobic002G425000--Sobic001G238300 Sobic002G261500 Sobic002G261500 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic006G260200 Sobic006G260200 Sobic002G425000--Sobic006G260200 Sobic004G297900 Sobic004G297900 Sobic002G425000--Sobic004G297900 SobicK026900 SobicK026900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic006G122800 Sobic006G122800 Sobic002G425000--Sobic006G122800 Sobic006G172601 Sobic006G172601 Sobic001G238300--Sobic006G172601 Sobic001G238300--Sobic002G261500 Sobic001G238300--Sobic004G297900 Sobic001G238300--Sobic002G425000 Sobic007G090469 Sobic007G090469 Sobic001G238300--Sobic007G090469 Sobic001G238300--SobicK026900 Sobic001G238300--Sobic006G260200 Sobic007G050200 Sobic007G050200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic002G261500--Sobic001G238300 Sobic002G261500--Sobic002G425000 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G042200 Sobic002G042200 Sobic002G261500--Sobic002G042200 Sobic002G261500--Sobic003G053400 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic002G261500--Sobic006G260200 Sobic006G158400 Sobic006G158400 Sobic008G127933--Sobic006G158400 Sobic008G127933--Sobic002G425000 Sobic008G127933--Sobic001G237900 Sobic007G204700 Sobic007G204700 Sobic008G127933--Sobic007G204700 Sobic008G128066 Sobic008G128066 Sobic008G127933--Sobic008G128066 Sobic010G270700 Sobic010G270700 Sobic008G127933--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic008G127933--Sobic008G009400 Sobic001G238400 Sobic001G238400 Sobic008G127933--Sobic001G238400 Sobic008G127933--SobicK026900 Sobic001G237900--Sobic001G238400 Sobic010G158500 Sobic010G158500 Sobic001G237900--Sobic010G158500 Sobic003G053300 Sobic003G053300 Sobic001G237900--Sobic003G053300 Sobic001G237900--Sobic006G158400 Sobic001G237900--Sobic002G425000 Sobic004G202400 Sobic004G202400 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic006G260200--Sobic001G238300 Sobic006G260200--Sobic002G425000 Sobic006G260200--Sobic002G261500 Sobic006G260200--Sobic004G297900 Sobic006G260200--Sobic006G122800 Sobic006G260200--Sobic007G090469 Sobic006G260200--Sobic004G202400 Sobic006G260200--Sobic002G042200 Sobic006G260200--Sobic001G237900 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 SobicK026900--Sobic001G238300 Sobic006G202600 Sobic006G202600 SobicK026900--Sobic006G202600 SobicK026900--Sobic004G202400 SobicK026900--Sobic002G425000 SobicK026900--Sobic010G270700 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100 Sobic003G053400--Sobic002G261500 Sobic009G088900 Sobic009G088900 Sobic003G053400--Sobic009G088900 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic003G053400--Sobic009G109000 Sobic003G053400--Sobic010G212500 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic003G053400--Sobic002G365801 Sobic003G384700 Sobic003G384700 Sobic006G122800--Sobic003G384700 Sobic006G122800--Sobic002G042200 Sobic006G122800--Sobic002G425000 Sobic002G053700 Sobic002G053700 Sobic006G122800--Sobic002G053700 Sobic005G063400 Sobic005G063400 Sobic006G122800--Sobic005G063400 Sobic010G161800 Sobic010G161800 Sobic006G122800--Sobic010G161800 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400
Octagon: transcription factors


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