Gene annotation
Transcriptome id Sobic.006G122800.1
Synonym Sb06g020320
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
dirigent, putative, expressed
UniProt C5YAT2
Pfam PF03018
Panther DB PTHR21495 PTHR21495:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65870 : Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os07g42520.1 : dirigent, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
2 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.002G425000 VQ domain containing protein, putative, expressed -
4 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.006G174300 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
9 Sobic.006G251400 heavy metal-associated domain containing protein, expressed -
10 Sobic.002G261500 AIR12, putative, expressed -
11 Sobic.001G238300 expansin precursor, putative, expressed -
12 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G157600 expressed protein -
15 Sobic.007G050200 DNA binding protein, putative, expressed -
16 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
17 Sobic.009G199001 - -
18 Sobic.003G351600 expressed protein -
19 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
20 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G122800 Sobic006G122800 Sobic003G384700 Sobic003G384700 Sobic006G122800--Sobic003G384700 Sobic002G042200 Sobic002G042200 Sobic006G122800--Sobic002G042200 Sobic002G425000 Sobic002G425000 Sobic006G122800--Sobic002G425000 Sobic002G053700 Sobic002G053700 Sobic006G122800--Sobic002G053700 Sobic005G063400 Sobic005G063400 Sobic006G122800--Sobic005G063400 Sobic010G161800 Sobic010G161800 Sobic006G122800--Sobic010G161800 Sobic006G260200 Sobic006G260200 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400 Sobic003G384700--Sobic006G122800 Sobic003G157600 Sobic003G157600 Sobic003G384700--Sobic003G157600 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic003G384700--Sobic002G042200 Sobic003G384700--Sobic010G161800 Sobic005G080400 Sobic005G080400 Sobic003G384700--Sobic005G080400 Sobic003G351600 Sobic003G351600 Sobic003G384700--Sobic003G351600 Sobic005G203200 Sobic005G203200 Sobic003G384700--Sobic005G203200 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G261500 Sobic002G261500 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic002G042200--Sobic003G157600 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic001G238300 Sobic001G238300 Sobic002G425000--Sobic001G238300 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic002G425000--Sobic006G260200 Sobic004G297900 Sobic004G297900 Sobic002G425000--Sobic004G297900 SobicK026900 SobicK026900 Sobic002G425000--SobicK026900 Sobic003G053400 Sobic003G053400 Sobic002G425000--Sobic003G053400 Sobic002G425000--Sobic006G122800 Sobic006G277700 Sobic006G277700 Sobic002G053700--Sobic006G277700 Sobic002G053700--Sobic005G063400 Sobic003G053600 Sobic003G053600 Sobic002G053700--Sobic003G053600 Sobic001G379400 Sobic001G379400 Sobic002G053700--Sobic001G379400 Sobic002G053700--Sobic006G122800 Sobic001G301300 Sobic001G301300 Sobic002G053700--Sobic001G301300 Sobic002G053700--Sobic006G174300 Sobic002G050300 Sobic002G050300 Sobic002G053700--Sobic002G050300 Sobic004G009400 Sobic004G009400 Sobic002G053700--Sobic004G009400 Sobic005G063400--Sobic003G053600 Sobic005G063400--Sobic002G053700 Sobic005G063400--Sobic004G009400 Sobic007G057400 Sobic007G057400 Sobic005G063400--Sobic007G057400 Sobic005G063400--Sobic006G122800 Sobic002G101400 Sobic002G101400 Sobic005G063400--Sobic002G101400 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic005G063400--Sobic006G174300 Sobic010G161800--Sobic006G122800 Sobic010G161800--Sobic002G425000 Sobic010G161800--Sobic005G063400 Sobic010G161800--Sobic006G260200 Sobic010G161800--Sobic002G053700 Sobic010G161800--Sobic003G384700 Sobic005G072900 Sobic005G072900 Sobic010G161800--Sobic005G072900 Sobic010G161800--Sobic006G174300 Sobic007G050200 Sobic007G050200 Sobic010G161800--Sobic007G050200 Sobic006G260200--Sobic001G238300 Sobic006G260200--Sobic002G425000 Sobic006G260200--Sobic002G261500 Sobic006G260200--Sobic004G297900 Sobic006G260200--Sobic006G122800 Sobic007G090469 Sobic007G090469 Sobic006G260200--Sobic007G090469 Sobic006G260200--Sobic004G202400 Sobic006G260200--Sobic002G042200 Sobic006G260200--Sobic001G237900 Sobic006G174300--Sobic006G277700 Sobic005G202300 Sobic005G202300 Sobic006G174300--Sobic005G202300 Sobic001G058300 Sobic001G058300 Sobic006G174300--Sobic001G058300 Sobic006G174300--Sobic003G053600 Sobic003G319400 Sobic003G319400 Sobic006G174300--Sobic003G319400 Sobic003G353200 Sobic003G353200 Sobic006G174300--Sobic003G353200 Sobic010G031700 Sobic010G031700 Sobic006G174300--Sobic010G031700 Sobic006G174300--Sobic001G379400 Sobic002G377700 Sobic002G377700 Sobic006G174300--Sobic002G377700 Sobic006G251400--Sobic002G042200 Sobic006G251400--Sobic006G122800 Sobic006G251400--Sobic001G058300 Sobic006G251400--Sobic006G174300 Sobic006G251400--Sobic007G050200 Sobic006G251400--Sobic003G351600 Sobic006G251400--Sobic002G101400 Sobic004G164300 Sobic004G164300 Sobic006G251400--Sobic004G164300 Sobic010G113100 Sobic010G113100 Sobic006G251400--Sobic010G113100
Octagon: transcription factors


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