Gene annotation
Transcriptome id Sobic.003G157600.1
Synonym Sb03g013740
Functional annotation expressed protein
UniProt A0A1B6Q3F2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g24420.1 : expressed protein
MaizeGDB (Corn) Zm00025a024477
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
2 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.006G197100 DNA binding protein, putative, expressed -
4 Sobic.003G184100 auxin-induced protein 5NG4, putative, expressed -
5 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
6 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
7 Sobic.002G261500 AIR12, putative, expressed -
8 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.004G349125 - -
10 Sobic.001G238300 expansin precursor, putative, expressed -
11 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.003G368600 terpene synthase, putative, expressed -
15 Sobic.006G157900 C2 domain containing protein, putative, expressed -
16 Sobic.002G425000 VQ domain containing protein, putative, expressed -
17 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G404600 regulatory protein, putative, expressed -
20 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -


Gene co-expression network
sample Sobic003G157600 Sobic003G157600 Sobic004G202400 Sobic004G202400 Sobic003G157600--Sobic004G202400 Sobic002G042200 Sobic002G042200 Sobic003G157600--Sobic002G042200 Sobic006G197100 Sobic006G197100 Sobic003G157600--Sobic006G197100 Sobic003G184100 Sobic003G184100 Sobic003G157600--Sobic003G184100 Sobic003G384700 Sobic003G384700 Sobic003G157600--Sobic003G384700 Sobic001G416200 Sobic001G416200 Sobic003G157600--Sobic001G416200 Sobic002G261500 Sobic002G261500 Sobic003G157600--Sobic002G261500 Sobic006G122800 Sobic006G122800 Sobic003G157600--Sobic006G122800 Sobic004G349125 Sobic004G349125 Sobic003G157600--Sobic004G349125 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G042000 Sobic004G042000 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic002G042200--Sobic004G202400 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic003G184100--Sobic003G157600 Sobic003G184100--Sobic004G202400 Sobic006G044100 Sobic006G044100 Sobic003G184100--Sobic006G044100 Sobic003G184100--Sobic006G197100 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic003G184100--Sobic004G042000 Sobic003G184100--Sobic004G349125 Sobic001G481400 Sobic001G481400 Sobic003G184100--Sobic001G481400 Sobic003G384700--Sobic006G122800 Sobic003G384700--Sobic003G157600 Sobic005G063400 Sobic005G063400 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic003G384700--Sobic002G042200 Sobic010G161800 Sobic010G161800 Sobic003G384700--Sobic010G161800 Sobic005G080400 Sobic005G080400 Sobic003G384700--Sobic005G080400 Sobic003G351600 Sobic003G351600 Sobic003G384700--Sobic003G351600 Sobic005G203200 Sobic005G203200 Sobic003G384700--Sobic005G203200 Sobic001G416200--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G416200--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G304100 Sobic001G304100 Sobic001G416200--Sobic001G304100 Sobic001G238300 Sobic001G238300 Sobic002G261500--Sobic001G238300 Sobic002G425000 Sobic002G425000 Sobic002G261500--Sobic002G425000 Sobic004G297900 Sobic004G297900 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic007G050200 Sobic007G050200 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic006G260200 Sobic006G260200 Sobic002G261500--Sobic006G260200 Sobic006G122800--Sobic003G384700 Sobic006G122800--Sobic002G042200 Sobic006G122800--Sobic002G425000 Sobic002G053700 Sobic002G053700 Sobic006G122800--Sobic002G053700 Sobic006G122800--Sobic005G063400 Sobic006G122800--Sobic010G161800 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G122800--Sobic006G251400 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800
Octagon: transcription factors


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