Gene annotation
Transcriptome id Sobic.003G184100.2,Sobic.003G184100.1
Synonym Sb03g024550
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt C5XMX9 , C5XMY3
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF34
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G64700 : nodulin MtN21 /EamA-like transporter family protein
RAP-DB (Rice) LOC_Os01g36580.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a028812
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G157600 expressed protein -
2 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
3 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.006G197100 DNA binding protein, putative, expressed -
5 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
6 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
7 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
8 Sobic.004G349125 - -
9 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.006G125100 ubiquitin family protein, putative, expressed -
11 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
12 Sobic.003G404600 regulatory protein, putative, expressed -
13 Sobic.003G255500 expressed protein -
14 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.010G185000 VQ domain containing protein, putative, expressed -
16 Sobic.009G187200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.003G255200 expressed protein -
18 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.008G172600 ATCHX, putative, expressed -


Gene co-expression network
sample Sobic003G184100 Sobic003G184100 Sobic003G157600 Sobic003G157600 Sobic003G184100--Sobic003G157600 Sobic004G202400 Sobic004G202400 Sobic003G184100--Sobic004G202400 Sobic006G044100 Sobic006G044100 Sobic003G184100--Sobic006G044100 Sobic006G197100 Sobic006G197100 Sobic003G184100--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G184100--Sobic001G416200 Sobic004G046200 Sobic004G046200 Sobic003G184100--Sobic004G046200 Sobic004G042000 Sobic004G042000 Sobic003G184100--Sobic004G042000 Sobic004G349125 Sobic004G349125 Sobic003G184100--Sobic004G349125 Sobic001G481400 Sobic001G481400 Sobic003G184100--Sobic001G481400 Sobic003G157600--Sobic004G202400 Sobic002G042200 Sobic002G042200 Sobic003G157600--Sobic002G042200 Sobic003G157600--Sobic006G197100 Sobic003G157600--Sobic003G184100 Sobic003G384700 Sobic003G384700 Sobic003G157600--Sobic003G384700 Sobic003G157600--Sobic001G416200 Sobic002G261500 Sobic002G261500 Sobic003G157600--Sobic002G261500 Sobic006G122800 Sobic006G122800 Sobic003G157600--Sobic006G122800 Sobic003G157600--Sobic004G349125 Sobic004G202400--Sobic006G197100 Sobic004G202400--Sobic001G416200 Sobic001G237900 Sobic001G237900 Sobic004G202400--Sobic001G237900 SobicK026900 SobicK026900 Sobic004G202400--SobicK026900 Sobic004G202400--Sobic003G157600 Sobic004G202400--Sobic004G349125 Sobic004G202400--Sobic004G042000 Sobic004G202400--Sobic002G042200 Sobic003G311800 Sobic003G311800 Sobic004G202400--Sobic003G311800 Sobic006G044100--Sobic004G046200 Sobic004G176600 Sobic004G176600 Sobic006G044100--Sobic004G176600 Sobic009G187200 Sobic009G187200 Sobic006G044100--Sobic009G187200 Sobic006G044100--Sobic001G481400 Sobic008G106700 Sobic008G106700 Sobic006G044100--Sobic008G106700 Sobic003G366600 Sobic003G366600 Sobic006G044100--Sobic003G366600 Sobic008G172600 Sobic008G172600 Sobic006G044100--Sobic008G172600 Sobic006G277600 Sobic006G277600 Sobic006G044100--Sobic006G277600 Sobic003G255200 Sobic003G255200 Sobic006G044100--Sobic003G255200 Sobic002G003800 Sobic002G003800 Sobic006G197100--Sobic002G003800 Sobic006G197100--Sobic004G042000 Sobic006G197100--Sobic004G349125 Sobic006G197100--Sobic001G416200 Sobic006G197100--Sobic004G202400 Sobic001G264000 Sobic001G264000 Sobic006G197100--Sobic001G264000 Sobic006G197100--Sobic003G311800 Sobic006G197100--Sobic002G042200 Sobic003G368600 Sobic003G368600 Sobic006G197100--Sobic003G368600 Sobic001G416200--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G416200--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G304100 Sobic001G304100 Sobic001G416200--Sobic001G304100 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic003G084400 Sobic003G084400 Sobic004G046200--Sobic003G084400 Sobic004G046200--Sobic003G255200 Sobic001G500000 Sobic001G500000 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic004G042000--Sobic006G197100 Sobic004G042000--Sobic002G003800 Sobic004G042000--Sobic004G349125 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic004G042000--Sobic001G264000 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic003G228600 Sobic003G228600 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800 Sobic009G240600 Sobic009G240600 Sobic001G481400--Sobic009G240600 Sobic001G481400--Sobic001G500000 Sobic001G231700 Sobic001G231700 Sobic001G481400--Sobic001G231700 Sobic001G476500 Sobic001G476500 Sobic001G481400--Sobic001G476500 Sobic001G481400--Sobic004G046200 Sobic003G417800 Sobic003G417800 Sobic001G481400--Sobic003G417800 Sobic001G481400--Sobic006G044100 Sobic002G287100 Sobic002G287100 Sobic001G481400--Sobic002G287100 Sobic001G481400--Sobic006G277600
Octagon: transcription factors


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