Gene annotation
Transcriptome id Sobic.010G185000.1
Synonym MKS1, Sb10g023570
Functional annotation VQ domain containing protein, putative, expressed
UniProt C5Z5N1
Pfam PF05678
Panther DB PTHR33143 PTHR33143:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18690 : MAP kinase substrate 1
RAP-DB (Rice) LOC_Os06g40090.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042231
Brachypodium KQK17769
Barley HORVU7Hr1G089880.1
Wheat TraesCS7A02G375900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
2 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
3 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
5 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
6 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.005G206601 - -
9 Sobic.007G151300 Cupin domain containing protein, expressed -
10 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
11 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.009G072900 calmodulin-binding protein, putative, expressed -
14 Sobic.010G001000 expressed protein -
15 Sobic.004G176600 no apical meristem protein, putative, expressed -
16 Sobic.009G003600 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
17 Sobic.006G125100 ubiquitin family protein, putative, expressed -
18 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G404600 regulatory protein, putative, expressed -
20 Sobic.002G017800 expressed protein -


Gene co-expression network
sample Sobic010G185000 Sobic010G185000 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic009G240600 Sobic009G240600 Sobic010G185000--Sobic009G240600 Sobic004G348400 Sobic004G348400 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic001G481400 Sobic001G481400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic001G462700 Sobic001G462700 Sobic002G247600--Sobic001G462700 Sobic002G247600--Sobic010G185000 Sobic009G003600 Sobic009G003600 Sobic002G247600--Sobic009G003600 Sobic002G247600--Sobic004G348400 Sobic001G331200 Sobic001G331200 Sobic002G247600--Sobic001G331200 Sobic001G333400 Sobic001G333400 Sobic002G247600--Sobic001G333400 Sobic002G247600--Sobic007G151300 Sobic002G247600--Sobic005G206601 Sobic003G117600 Sobic003G117600 Sobic002G247600--Sobic003G117600 Sobic002G245100 Sobic002G245100 Sobic005G018700--Sobic002G245100 Sobic002G017800 Sobic002G017800 Sobic005G018700--Sobic002G017800 Sobic006G103000 Sobic006G103000 Sobic005G018700--Sobic006G103000 Sobic005G018700--Sobic010G185000 Sobic003G429000 Sobic003G429000 Sobic005G018700--Sobic003G429000 Sobic003G037800 Sobic003G037800 Sobic005G018700--Sobic003G037800 Sobic004G340900 Sobic004G340900 Sobic005G018700--Sobic004G340900 Sobic001G050100 Sobic001G050100 Sobic005G018700--Sobic001G050100 Sobic003G192100 Sobic003G192100 Sobic005G018700--Sobic003G192100 Sobic006G099900 Sobic006G099900 Sobic007G227300--Sobic006G099900 Sobic003G200700 Sobic003G200700 Sobic007G227300--Sobic003G200700 Sobic001G400800 Sobic001G400800 Sobic007G227300--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic007G227300--Sobic003G252800 Sobic006G268800 Sobic006G268800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic004G148200 Sobic004G148200 Sobic007G227300--Sobic004G148200 Sobic007G227300--Sobic009G240600 Sobic007G227300--Sobic005G206601 Sobic009G240600--Sobic001G481400 Sobic009G240600--Sobic007G227300 Sobic001G231700 Sobic001G231700 Sobic009G240600--Sobic001G231700 Sobic009G240600--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic009G240600--Sobic001G500000 Sobic002G287100 Sobic002G287100 Sobic009G240600--Sobic002G287100 Sobic001G476500 Sobic001G476500 Sobic009G240600--Sobic001G476500 Sobic003G417800 Sobic003G417800 Sobic009G240600--Sobic003G417800 Sobic001G192200 Sobic001G192200 Sobic009G240600--Sobic001G192200 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic003G366600 Sobic003G366600 Sobic004G348400--Sobic003G366600 Sobic003G368600 Sobic003G368600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G176600 Sobic004G176600 Sobic004G348400--Sobic004G176600 Sobic006G044100 Sobic006G044100 Sobic004G348400--Sobic006G044100 Sobic006G243600 Sobic006G243600 Sobic004G348400--Sobic006G243600 Sobic002G375400--Sobic004G176600 Sobic004G107700 Sobic004G107700 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic002G375400--Sobic005G206601 Sobic003G437200 Sobic003G437200 Sobic002G375400--Sobic003G437200 Sobic009G072900 Sobic009G072900 Sobic002G375400--Sobic009G072900 Sobic002G375400--Sobic003G417800 Sobic001G403000 Sobic001G403000 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic001G481400--Sobic009G240600 Sobic001G481400--Sobic001G500000 Sobic001G481400--Sobic001G231700 Sobic001G481400--Sobic001G476500 Sobic004G046200 Sobic004G046200 Sobic001G481400--Sobic004G046200 Sobic001G481400--Sobic003G417800 Sobic001G481400--Sobic006G044100 Sobic001G481400--Sobic002G287100 Sobic001G481400--Sobic006G277600 Sobic005G206601--Sobic007G227300 Sobic005G206601--Sobic003G252800 Sobic005G206601--Sobic003G117600 Sobic005G206601--Sobic006G099900 Sobic005G206601--Sobic006G277600 Sobic001G348700 Sobic001G348700 Sobic005G206601--Sobic001G348700 Sobic005G206601--Sobic009G240600 Sobic010G084700 Sobic010G084700 Sobic005G206601--Sobic010G084700 Sobic005G206601--Sobic001G400800 Sobic010G270500 Sobic010G270500 Sobic007G151300--Sobic010G270500 Sobic007G151300--Sobic002G247600 Sobic007G151300--Sobic010G185000 Sobic003G007600 Sobic003G007600 Sobic007G151300--Sobic003G007600 Sobic007G151300--Sobic006G243600 Sobic007G151300--Sobic001G050100 Sobic004G159733 Sobic004G159733 Sobic007G151300--Sobic004G159733 Sobic007G151300--Sobic002G017800 Sobic007G151300--Sobic001G462700
Octagon: transcription factors


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