Gene annotation
Transcriptome id Sobic.004G176600.1
Synonym ANAC104, XND1, Sb04g022672
Functional annotation no apical meristem protein, putative, expressed
UniProt A0A194YQD2
Pfam PF02365
Panther DB PTHR31719 PTHR31719:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G64530 : xylem NAC domain 1
RAP-DB (Rice) LOC_Os02g34970.1 : no apical meristem protein, putative, expressed
MaizeGDB (Corn) Zm00025a020653
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.002G375400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.004G107700 expressed protein -
4 Sobic.005G084600 ARGOS, putative, expressed -
5 Sobic.003G255200 expressed protein -
6 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
7 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
8 Sobic.010G185000 VQ domain containing protein, putative, expressed -
9 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
10 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
11 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
12 Sobic.001G403000 expressed protein -
13 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
14 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
15 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
16 Sobic.003G255500 expressed protein -
17 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
18 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
19 Sobic.002G312900 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.005G092900 - -


Gene co-expression network
sample Sobic004G176600 Sobic004G176600 Sobic006G044100 Sobic006G044100 Sobic004G176600--Sobic006G044100 Sobic002G375400 Sobic002G375400 Sobic004G176600--Sobic002G375400 Sobic004G107700 Sobic004G107700 Sobic004G176600--Sobic004G107700 Sobic005G084600 Sobic005G084600 Sobic004G176600--Sobic005G084600 Sobic003G255200 Sobic003G255200 Sobic004G176600--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G176600--Sobic003G437200 Sobic003G417800 Sobic003G417800 Sobic004G176600--Sobic003G417800 Sobic010G185000 Sobic010G185000 Sobic004G176600--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic004G176600--Sobic004G348400 Sobic004G046200 Sobic004G046200 Sobic006G044100--Sobic004G046200 Sobic006G044100--Sobic004G176600 Sobic009G187200 Sobic009G187200 Sobic006G044100--Sobic009G187200 Sobic001G481400 Sobic001G481400 Sobic006G044100--Sobic001G481400 Sobic008G106700 Sobic008G106700 Sobic006G044100--Sobic008G106700 Sobic003G366600 Sobic003G366600 Sobic006G044100--Sobic003G366600 Sobic008G172600 Sobic008G172600 Sobic006G044100--Sobic008G172600 Sobic006G277600 Sobic006G277600 Sobic006G044100--Sobic006G277600 Sobic006G044100--Sobic003G255200 Sobic002G375400--Sobic004G176600 Sobic002G375400--Sobic004G107700 Sobic002G375400--Sobic010G185000 Sobic005G206601 Sobic005G206601 Sobic002G375400--Sobic005G206601 Sobic002G375400--Sobic003G437200 Sobic009G072900 Sobic009G072900 Sobic002G375400--Sobic009G072900 Sobic002G375400--Sobic003G417800 Sobic001G403000 Sobic001G403000 Sobic002G375400--Sobic001G403000 Sobic002G375400--Sobic004G348400 Sobic004G107700--Sobic003G255200 Sobic004G107700--Sobic003G437200 Sobic002G125700 Sobic002G125700 Sobic004G107700--Sobic002G125700 Sobic004G107700--Sobic003G417800 Sobic001G503100 Sobic001G503100 Sobic004G107700--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic004G107700--Sobic002G034800 Sobic009G139400 Sobic009G139400 Sobic004G107700--Sobic009G139400 Sobic003G352300 Sobic003G352300 Sobic004G107700--Sobic003G352300 Sobic004G107700--Sobic004G176600 Sobic005G084600--Sobic004G176600 Sobic001G339700 Sobic001G339700 Sobic005G084600--Sobic001G339700 Sobic009G120000 Sobic009G120000 Sobic005G084600--Sobic009G120000 Sobic008G032100 Sobic008G032100 Sobic005G084600--Sobic008G032100 Sobic005G084600--Sobic005G206601 Sobic005G084600--Sobic002G375400 Sobic010G009300 Sobic010G009300 Sobic005G084600--Sobic010G009300 Sobic005G084600--Sobic010G185000 Sobic005G084600--Sobic003G417800 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic003G255200--Sobic008G172600 Sobic003G255200--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic003G255200--Sobic010G259600 Sobic001G449600 Sobic001G449600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic003G255200--Sobic002G034800 Sobic003G437200--Sobic004G107700 Sobic003G437200--Sobic003G417800 Sobic006G084600 Sobic006G084600 Sobic003G437200--Sobic006G084600 Sobic003G062600 Sobic003G062600 Sobic003G437200--Sobic003G062600 Sobic003G437200--Sobic001G403000 Sobic007G155100 Sobic007G155100 Sobic003G437200--Sobic007G155100 Sobic001G119400 Sobic001G119400 Sobic003G437200--Sobic001G119400 Sobic003G437200--Sobic004G176600 Sobic003G437200--Sobic002G375400 Sobic001G476500 Sobic001G476500 Sobic003G417800--Sobic001G476500 Sobic003G417800--Sobic003G437200 Sobic009G183400 Sobic009G183400 Sobic003G417800--Sobic009G183400 Sobic003G417800--Sobic003G062600 Sobic003G417800--Sobic001G119400 Sobic003G417800--Sobic004G107700 Sobic006G099900 Sobic006G099900 Sobic003G417800--Sobic006G099900 Sobic003G417800--Sobic003G352300 Sobic009G240600 Sobic009G240600 Sobic003G417800--Sobic009G240600 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic010G185000--Sobic009G240600 Sobic010G185000--Sobic004G348400 Sobic010G185000--Sobic002G375400 Sobic010G185000--Sobic001G481400 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic003G011600 Sobic003G011600 Sobic004G348400--Sobic003G011600 Sobic004G348400--Sobic003G366600 Sobic003G368600 Sobic003G368600 Sobic004G348400--Sobic003G368600 Sobic004G348400--Sobic002G247600 Sobic004G348400--Sobic010G185000 Sobic004G348400--Sobic002G375400 Sobic004G348400--Sobic004G176600 Sobic004G348400--Sobic006G044100 Sobic006G243600 Sobic006G243600 Sobic004G348400--Sobic006G243600
Octagon: transcription factors


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