Gene annotation
Transcriptome id Sobic.009G179900.2
Synonym CAM2, ATCAL5, Sb09g024030
Functional annotation OsCML9 - Calmodulin-related calcium sensor protein, expressed
UniProt A0A1Z5R3A4
Pfam PF13833
Panther DB PTHR23050
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K02183; calmodulin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41110 : calmodulin 2
RAP-DB (Rice) LOC_Os05g41200.1 : OsCML9 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a037832
Brachypodium KQK05658
Barley HORVU0Hr1G001280.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G106700 isoflavone reductase, putative, expressed -
2 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
3 Sobic.003G255200 expressed protein -
4 Sobic.006G044100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.004G176600 no apical meristem protein, putative, expressed -
6 Sobic.001G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bHelix-loop-helix transcription factor, putative, expressed -
7 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
8 Sobic.002G034800 - -
9 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
10 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
11 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
12 Sobic.005G084600 ARGOS, putative, expressed -
13 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
14 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
16 Sobic.003G011600 3-methyl-2-oxobutanoate hydroxymethyltransferase, putative, expressed K00606: 3-methyl-2-oxobutanoate hydroxymethyltransferase
17 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
18 Sobic.004G107700 expressed protein -
19 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic009G179900 Sobic009G179900 Sobic008G106700 Sobic008G106700 Sobic009G179900--Sobic008G106700 Sobic003G062600 Sobic003G062600 Sobic009G179900--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G179900--Sobic003G255200 Sobic006G044100 Sobic006G044100 Sobic009G179900--Sobic006G044100 Sobic004G176600 Sobic004G176600 Sobic009G179900--Sobic004G176600 Sobic001G082600 Sobic001G082600 Sobic009G179900--Sobic001G082600 Sobic004G046200 Sobic004G046200 Sobic009G179900--Sobic004G046200 Sobic002G034800 Sobic002G034800 Sobic009G179900--Sobic002G034800 Sobic003G417800 Sobic003G417800 Sobic009G179900--Sobic003G417800 Sobic008G106700--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic008G106700--Sobic001G500000 Sobic008G106700--Sobic006G044100 Sobic003G084400 Sobic003G084400 Sobic008G106700--Sobic003G084400 Sobic003G079400 Sobic003G079400 Sobic008G106700--Sobic003G079400 Sobic009G183400 Sobic009G183400 Sobic008G106700--Sobic009G183400 Sobic008G106700--Sobic009G179900 Sobic001G139100 Sobic001G139100 Sobic008G106700--Sobic001G139100 Sobic006G199800 Sobic006G199800 Sobic008G106700--Sobic006G199800 Sobic003G062600--Sobic003G417800 Sobic003G437200 Sobic003G437200 Sobic003G062600--Sobic003G437200 Sobic001G119400 Sobic001G119400 Sobic003G062600--Sobic001G119400 Sobic004G107700 Sobic004G107700 Sobic003G062600--Sobic004G107700 Sobic003G062600--Sobic009G183400 Sobic003G062600--Sobic006G044100 Sobic005G183100 Sobic005G183100 Sobic003G062600--Sobic005G183100 Sobic003G062600--Sobic003G255200 Sobic003G062600--Sobic004G176600 Sobic003G255200--Sobic004G107700 Sobic002G125700 Sobic002G125700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic003G255200--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic003G255200--Sobic010G259600 Sobic001G449600 Sobic001G449600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic001G503100 Sobic001G503100 Sobic003G255200--Sobic001G503100 Sobic003G255200--Sobic002G034800 Sobic006G044100--Sobic004G046200 Sobic006G044100--Sobic004G176600 Sobic009G187200 Sobic009G187200 Sobic006G044100--Sobic009G187200 Sobic001G481400 Sobic001G481400 Sobic006G044100--Sobic001G481400 Sobic006G044100--Sobic008G106700 Sobic003G366600 Sobic003G366600 Sobic006G044100--Sobic003G366600 Sobic006G044100--Sobic008G172600 Sobic006G277600 Sobic006G277600 Sobic006G044100--Sobic006G277600 Sobic006G044100--Sobic003G255200 Sobic004G176600--Sobic006G044100 Sobic002G375400 Sobic002G375400 Sobic004G176600--Sobic002G375400 Sobic004G176600--Sobic004G107700 Sobic005G084600 Sobic005G084600 Sobic004G176600--Sobic005G084600 Sobic004G176600--Sobic003G255200 Sobic004G176600--Sobic003G437200 Sobic004G176600--Sobic003G417800 Sobic010G185000 Sobic010G185000 Sobic004G176600--Sobic010G185000 Sobic004G348400 Sobic004G348400 Sobic004G176600--Sobic004G348400 Sobic001G082600--Sobic003G079400 Sobic001G082600--Sobic004G046200 Sobic001G082600--Sobic006G044100 Sobic003G011600 Sobic003G011600 Sobic001G082600--Sobic003G011600 Sobic001G082600--Sobic003G255200 Sobic007G215900 Sobic007G215900 Sobic001G082600--Sobic007G215900 Sobic001G082600--Sobic008G106700 Sobic001G082600--Sobic004G176600 Sobic001G082600--Sobic009G179900 Sobic004G046200--Sobic008G106700 Sobic004G046200--Sobic006G044100 Sobic004G046200--Sobic009G187200 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic010G066700 Sobic010G066700 Sobic002G034800--Sobic010G066700 Sobic009G139400 Sobic009G139400 Sobic002G034800--Sobic009G139400 Sobic002G034800--Sobic004G107700 Sobic003G280200 Sobic003G280200 Sobic002G034800--Sobic003G280200 Sobic009G077800 Sobic009G077800 Sobic002G034800--Sobic009G077800 Sobic002G034800--Sobic003G255200 Sobic002G034800--Sobic001G119400 Sobic002G034800--Sobic009G183400 Sobic002G034800--Sobic010G259600 Sobic001G476500 Sobic001G476500 Sobic003G417800--Sobic001G476500 Sobic003G417800--Sobic003G437200 Sobic003G417800--Sobic009G183400 Sobic003G417800--Sobic003G062600 Sobic003G417800--Sobic001G119400 Sobic003G417800--Sobic004G107700 Sobic006G099900 Sobic006G099900 Sobic003G417800--Sobic006G099900 Sobic003G352300 Sobic003G352300 Sobic003G417800--Sobic003G352300 Sobic009G240600 Sobic009G240600 Sobic003G417800--Sobic009G240600
Octagon: transcription factors


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