Gene annotation
| Transcriptome id | Sobic.003G062600.1 |
|---|---|
| Synonym | Sb03g005340, UGT84A1 |
| Functional annotation | limonoid UDP-glucosyltransferase, putative, expressed |
| UniProt | C5XP84 |
| Pfam | PF00201 |
| Panther DB | PTHR11926 PTHR11926:SF167 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process |
Orthologs (automatic annotation)
| TAIR | AT4G15480 : UDP-Glycosyltransferase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g09510.1 : limonoid UDP-glucosyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a021042 , Zm00025a029202 , Zm00025a023168 , Zm00025a034708 , Zm00025a019361 , Zm00025a017721 , Zm00025a042678 , Zm00025a006790 |
| Brachypodium | PNT66060 , KQK00459 |
| Barley | HORVU6Hr1G035370.2 , HORVU6Hr1G035370.3 , HORVU6Hr1G035370.1 , HORVU7Hr1G040760.1 , HORVU7Hr1G040760.2 , HORVU3Hr1G096330.1 , HORVU1Hr1G007810.2 , HORVU1Hr1G007810.5 , HORVU1Hr1G007810.4 , HORVU1Hr1G007810.1 , HORVU1Hr1G007810.3 , HORVU1Hr1G007810.6 |
| Wheat | TraesCS7A02G197800 , TraesCS5A02G393900 , TraesCS4A02G279400 , TraesCS3B02G282600 , TraesCS4D02G031500 |
| Populus | - |
JBrowse
| Sobic.003G062600 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G417800 | down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed | - |
| 2 | Sobic.003G437200 | sulfotransferase domain containing protein, expressed | - |
| 3 | Sobic.001G119400 | microsomal glutathione S-transferase 3, putative, expressed | K00799: GST, glutathione S-transferase |
| 4 | Sobic.004G107700 | expressed protein | - |
| 5 | Sobic.009G183400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed | - |
| 6 | Sobic.006G044100 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
| 7 | Sobic.005G183100 | sulfotransferase domain containing protein, expressed | - |
| 8 | Sobic.003G255200 | expressed protein | - |
| 9 | Sobic.004G176600 | no apical meristem protein, putative, expressed | - |
| 10 | Sobic.009G179900 | OsCML9 - Calmodulin-related calcium sensor protein, expressed | K02183: calmodulin |
| 11 | Sobic.003G352300 | triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed | K01803: TPI, triosephosphate isomerase (TIM) |
| 12 | Sobic.004G046200 | sulfotransferase domain containing protein, expressed | - |
| 13 | Sobic.001G476500 | helix-loop-helix DNA-binding protein, putative, expressed | - |
| 14 | Sobic.001G500000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 15 | Sobic.002G287100 | flavin-containing monooxygenase family protein, putative, expressed | - |
| 16 | Sobic.008G106700 | isoflavone reductase, putative, expressed | - |
| 17 | Sobic.001G481400 | similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 18 | Sobic.006G199800 | Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 19 | Sobic.002G034800 | - | - |
| 20 | Sobic.002G366600 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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