Gene annotation
| Transcriptome id | Sobic.003G437200.1 |
|---|---|
| Synonym | SOT17, ATSOT17, ATST5C, Sb03g046790 |
| Functional annotation | sulfotransferase domain containing protein, expressed |
| UniProt | A0A1B6Q8D9 |
| Pfam | PF00685 |
| Panther DB | PTHR11783 PTHR11783:SF94 |
| NCBI CDD | KOG1584; Sulfotransferase |
| KEGG Orthology | - |
| Gene Ontology | GO:0008146; sulfotransferase activity |
Orthologs (automatic annotation)
| TAIR | AT1G18590 : sulfotransferase 17 |
|---|---|
| RAP-DB (Rice) | LOC_Os09g08190.1 : sulfotransferase domain containing protein, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.003G437200 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G107700 | expressed protein | - |
| 2 | Sobic.003G417800 | down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed | - |
| 3 | Sobic.006G084600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed | - |
| 4 | Sobic.003G062600 | limonoid UDP-glucosyltransferase, putative, expressed | - |
| 5 | Sobic.001G403000 | expressed protein | - |
| 6 | Sobic.007G155100 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed | K01674: carbonic anhydrase |
| 7 | Sobic.001G119400 | microsomal glutathione S-transferase 3, putative, expressed | K00799: GST, glutathione S-transferase |
| 8 | Sobic.004G176600 | no apical meristem protein, putative, expressed | - |
| 9 | Sobic.002G375400 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 10 | Sobic.001G365100 | lipase, putative, expressed | - |
| 11 | Sobic.003G240600 | VQ domain containing protein, putative, expressed | - |
| 12 | Sobic.006G099900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed | - |
| 13 | Sobic.009G183400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed | - |
| 14 | Sobic.003G252800 | hypothetical protein | - |
| 15 | Sobic.003G430600 | OsCML19 - Calmodulin-related calcium sensor protein, expressed | K13448: calcium-binding protein CML |
| 16 | Sobic.009G240600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed | - |
| 17 | Sobic.008G063400 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 18 | Sobic.001G481400 | similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | K09286: EREBP-like factor |
| 19 | Sobic.010G066700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed | - |
| 20 | Sobic.001G231700 | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
Gene co-expression network
Octagon: transcription factors
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