Gene annotation
Transcriptome id Sobic.003G240600.1
Synonym
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1B6Q507
Pfam PF05678
Panther DB PTHR34777
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g46440.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028222
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G325000 expressed protein -
3 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
4 Sobic.001G348700 - -
5 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
6 Sobic.003G252800 hypothetical protein -
7 Sobic.003G317100 expressed protein -
8 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
9 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
10 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.004G107700 expressed protein -
12 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
14 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
15 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
16 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
18 Sobic.007G057000 expressed protein -
19 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.002G034800 - -


Gene co-expression network
sample Sobic003G240600 Sobic003G240600 Sobic001G317200 Sobic001G317200 Sobic003G240600--Sobic001G317200 Sobic001G325000 Sobic001G325000 Sobic003G240600--Sobic001G325000 Sobic006G084600 Sobic006G084600 Sobic003G240600--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic003G240600--Sobic001G348700 Sobic004G216600 Sobic004G216600 Sobic003G240600--Sobic004G216600 Sobic003G252800 Sobic003G252800 Sobic003G240600--Sobic003G252800 Sobic003G317100 Sobic003G317100 Sobic003G240600--Sobic003G317100 Sobic002G414600 Sobic002G414600 Sobic003G240600--Sobic002G414600 Sobic003G437200 Sobic003G437200 Sobic003G240600--Sobic003G437200 Sobic005G051200 Sobic005G051200 Sobic001G317200--Sobic005G051200 Sobic006G099900 Sobic006G099900 Sobic001G317200--Sobic006G099900 Sobic001G317200--Sobic003G252800 Sobic010G084400 Sobic010G084400 Sobic001G317200--Sobic010G084400 Sobic003G286600 Sobic003G286600 Sobic001G317200--Sobic003G286600 Sobic008G050600 Sobic008G050600 Sobic001G317200--Sobic008G050600 Sobic001G317200--Sobic003G240600 Sobic005G101800 Sobic005G101800 Sobic001G317200--Sobic005G101800 Sobic002G416600 Sobic002G416600 Sobic001G317200--Sobic002G416600 Sobic001G325000--Sobic003G240600 Sobic009G164600 Sobic009G164600 Sobic001G325000--Sobic009G164600 Sobic001G325000--Sobic001G317200 Sobic001G325000--Sobic005G051200 Sobic007G057000 Sobic007G057000 Sobic001G325000--Sobic007G057000 Sobic001G325000--Sobic004G216600 Sobic009G183400 Sobic009G183400 Sobic001G325000--Sobic009G183400 Sobic001G325000--Sobic002G414600 Sobic001G325000--Sobic008G050600 Sobic004G221500 Sobic004G221500 Sobic006G084600--Sobic004G221500 Sobic007G067350 Sobic007G067350 Sobic006G084600--Sobic007G067350 Sobic007G155100 Sobic007G155100 Sobic006G084600--Sobic007G155100 Sobic006G084600--Sobic003G317100 Sobic006G084600--Sobic003G437200 Sobic007G066932 Sobic007G066932 Sobic006G084600--Sobic007G066932 Sobic006G084600--Sobic001G348700 Sobic010G084300 Sobic010G084300 Sobic006G084600--Sobic010G084300 Sobic001G231600 Sobic001G231600 Sobic006G084600--Sobic001G231600 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic010G084700 Sobic010G084700 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic010G117900 Sobic010G117900 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic001G348700--Sobic004G216600 Sobic001G348700--Sobic006G099900 Sobic001G348700--Sobic001G317200 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic001G119400 Sobic001G119400 Sobic004G216600--Sobic001G119400 Sobic001G319600 Sobic001G319600 Sobic004G216600--Sobic001G319600 Sobic004G216600--Sobic001G317200 Sobic004G216600--Sobic009G183400 Sobic002G393000 Sobic002G393000 Sobic004G216600--Sobic002G393000 Sobic004G216600--Sobic004G221500 Sobic001G423800 Sobic001G423800 Sobic004G216600--Sobic001G423800 Sobic004G216600--Sobic001G348700 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic007G227300 Sobic007G227300 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic009G128700 Sobic009G128700 Sobic003G252800--Sobic009G128700 Sobic003G252800--Sobic004G221500 Sobic003G317100--Sobic003G286600 Sobic003G317100--Sobic006G099900 Sobic003G317100--Sobic006G084600 Sobic003G317100--Sobic004G221500 Sobic003G352300 Sobic003G352300 Sobic003G317100--Sobic003G352300 Sobic005G045900 Sobic005G045900 Sobic003G317100--Sobic005G045900 Sobic001G435000 Sobic001G435000 Sobic003G317100--Sobic001G435000 Sobic010G044400 Sobic010G044400 Sobic003G317100--Sobic010G044400 Sobic004G229800 Sobic004G229800 Sobic003G317100--Sobic004G229800 Sobic001G252300 Sobic001G252300 Sobic002G414600--Sobic001G252300 Sobic002G414600--Sobic009G183400 Sobic001G097600 Sobic001G097600 Sobic002G414600--Sobic001G097600 Sobic002G414600--Sobic002G393000 Sobic002G414600--Sobic001G119400 Sobic009G008900 Sobic009G008900 Sobic002G414600--Sobic009G008900 Sobic002G414600--Sobic005G051200 Sobic006G173900 Sobic006G173900 Sobic002G414600--Sobic006G173900 Sobic006G275200 Sobic006G275200 Sobic002G414600--Sobic006G275200 Sobic004G107700 Sobic004G107700 Sobic003G437200--Sobic004G107700 Sobic003G417800 Sobic003G417800 Sobic003G437200--Sobic003G417800 Sobic003G437200--Sobic006G084600 Sobic003G062600 Sobic003G062600 Sobic003G437200--Sobic003G062600 Sobic001G403000 Sobic001G403000 Sobic003G437200--Sobic001G403000 Sobic003G437200--Sobic007G155100 Sobic003G437200--Sobic001G119400 Sobic004G176600 Sobic004G176600 Sobic003G437200--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic003G437200--Sobic002G375400
Octagon: transcription factors


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