Gene annotation
Transcriptome id Sobic.004G216600.1
Synonym Sb04g026180
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
OsGrx_C2.1 - glutaredoxin subgroup I, expressed
UniProt C5XXQ2
Pfam PF00462
Panther DB PTHR10168:SF104 PTHR10168
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0009055; electron transfer activity GO:0015035protein disulfide oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G40370 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os02g40500.1 : OsGrx_C2.1 - glutaredoxin subgroup I, expressed
MaizeGDB (Corn) Zm00025a021138
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
2 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
6 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
7 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
8 Sobic.001G423800 DNA binding protein, putative, expressed -
9 Sobic.001G348700 - -
10 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.003G252800 hypothetical protein -
12 Sobic.003G240600 VQ domain containing protein, putative, expressed -
13 Sobic.002G261000 expressed protein -
14 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
15 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
16 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
17 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
18 Sobic.001G325000 expressed protein -
19 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
20 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic004G216600 Sobic004G216600 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic001G119400 Sobic001G119400 Sobic004G216600--Sobic001G119400 Sobic001G319600 Sobic001G319600 Sobic004G216600--Sobic001G319600 Sobic001G317200 Sobic001G317200 Sobic004G216600--Sobic001G317200 Sobic009G183400 Sobic009G183400 Sobic004G216600--Sobic009G183400 Sobic002G393000 Sobic002G393000 Sobic004G216600--Sobic002G393000 Sobic004G221500 Sobic004G221500 Sobic004G216600--Sobic004G221500 Sobic001G423800 Sobic001G423800 Sobic004G216600--Sobic001G423800 Sobic001G348700 Sobic001G348700 Sobic004G216600--Sobic001G348700 Sobic009G061200--Sobic004G216600 Sobic009G061200--Sobic009G183400 Sobic001G476500 Sobic001G476500 Sobic009G061200--Sobic001G476500 Sobic009G061200--Sobic001G119400 Sobic009G061200--Sobic001G423800 Sobic002G361100 Sobic002G361100 Sobic009G061200--Sobic002G361100 Sobic002G188900 Sobic002G188900 Sobic009G061200--Sobic002G188900 Sobic009G008900 Sobic009G008900 Sobic009G061200--Sobic009G008900 Sobic004G100700 Sobic004G100700 Sobic009G061200--Sobic004G100700 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G038900 Sobic001G038900 Sobic001G119400--Sobic001G038900 Sobic006G275200 Sobic006G275200 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic001G319600--Sobic004G216600 Sobic001G319600--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic001G319600--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic001G319600--Sobic010G084700 Sobic001G319600--Sobic006G275200 Sobic001G319600--Sobic009G061200 Sobic002G261000 Sobic002G261000 Sobic001G319600--Sobic002G261000 Sobic006G173900 Sobic006G173900 Sobic001G319600--Sobic006G173900 Sobic001G231600 Sobic001G231600 Sobic001G319600--Sobic001G231600 Sobic005G051200 Sobic005G051200 Sobic001G317200--Sobic005G051200 Sobic001G317200--Sobic006G099900 Sobic003G252800 Sobic003G252800 Sobic001G317200--Sobic003G252800 Sobic010G084400 Sobic010G084400 Sobic001G317200--Sobic010G084400 Sobic003G286600 Sobic003G286600 Sobic001G317200--Sobic003G286600 Sobic008G050600 Sobic008G050600 Sobic001G317200--Sobic008G050600 Sobic003G240600 Sobic003G240600 Sobic001G317200--Sobic003G240600 Sobic005G101800 Sobic005G101800 Sobic001G317200--Sobic005G101800 Sobic002G416600 Sobic002G416600 Sobic001G317200--Sobic002G416600 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic006G092500 Sobic006G092500 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic009G183400--Sobic004G100700 Sobic001G140900 Sobic001G140900 Sobic009G183400--Sobic001G140900 Sobic002G393000--Sobic001G119400 Sobic002G393000--Sobic006G275200 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic002G393000--Sobic009G008900 Sobic008G136400 Sobic008G136400 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G393000--Sobic002G414600 Sobic002G393000--Sobic009G183400 Sobic004G221500--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic002G184200 Sobic002G184200 Sobic004G221500--Sobic002G184200 Sobic004G221500--Sobic001G423800 Sobic010G084100 Sobic010G084100 Sobic004G221500--Sobic010G084100 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic010G117900 Sobic010G117900 Sobic004G221500--Sobic010G117900 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic002G140400 Sobic002G140400 Sobic001G423800--Sobic002G140400 Sobic001G423800--Sobic001G038900 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic001G423800--Sobic008G136400 Sobic001G423800--Sobic002G393000 Sobic004G189400 Sobic004G189400 Sobic001G423800--Sobic004G189400 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic001G348700--Sobic004G216600 Sobic001G348700--Sobic006G099900 Sobic001G348700--Sobic001G317200
Octagon: transcription factors


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