Gene annotation
Transcriptome id Sobic.001G319600.1
Synonym ATGSTU17, Sb01g031040, Glutathione S-transferase, GST30B, GST30, ERD9, GST 31
Functional annotation Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress (PubMedID : 26645959)
glutathione S-transferase, putative, expressed
UniProt C5WUK2
Pfam PF00043 PF02798
Panther DB PTHR11260 PTHR11260:SF214
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10370 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os10g38140.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) Zm00025a042293
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
2 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
4 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
5 Sobic.006G275200 CHCH domain containing protein, expressed -
6 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
7 Sobic.002G261000 expressed protein -
8 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
9 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
10 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.010G099900 expressed protein -
13 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.008G136400 expressed protein -
15 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
16 Sobic.001G423800 DNA binding protein, putative, expressed -
17 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
18 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
19 Sobic.001G319500 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -


Gene co-expression network
sample Sobic001G319600 Sobic001G319600 Sobic004G216600 Sobic004G216600 Sobic001G319600--Sobic004G216600 Sobic002G361100 Sobic002G361100 Sobic001G319600--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic001G319600--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic001G319600--Sobic010G084700 Sobic006G275200 Sobic006G275200 Sobic001G319600--Sobic006G275200 Sobic009G061200 Sobic009G061200 Sobic001G319600--Sobic009G061200 Sobic002G261000 Sobic002G261000 Sobic001G319600--Sobic002G261000 Sobic006G173900 Sobic006G173900 Sobic001G319600--Sobic006G173900 Sobic001G231600 Sobic001G231600 Sobic001G319600--Sobic001G231600 Sobic004G216600--Sobic009G061200 Sobic001G119400 Sobic001G119400 Sobic004G216600--Sobic001G119400 Sobic004G216600--Sobic001G319600 Sobic001G317200 Sobic001G317200 Sobic004G216600--Sobic001G317200 Sobic009G183400 Sobic009G183400 Sobic004G216600--Sobic009G183400 Sobic002G393000 Sobic002G393000 Sobic004G216600--Sobic002G393000 Sobic004G221500 Sobic004G221500 Sobic004G216600--Sobic004G221500 Sobic001G423800 Sobic001G423800 Sobic004G216600--Sobic001G423800 Sobic001G348700 Sobic001G348700 Sobic004G216600--Sobic001G348700 Sobic002G361100--Sobic009G061200 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic009G224100 Sobic009G224100 Sobic002G361100--Sobic009G224100 Sobic004G037000 Sobic004G037000 Sobic002G361100--Sobic004G037000 Sobic010G084600 Sobic010G084600 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic002G361100--Sobic004G216600 Sobic002G195400 Sobic002G195400 Sobic007G067600--Sobic002G195400 Sobic007G066932 Sobic007G066932 Sobic007G067600--Sobic007G066932 Sobic001G319700 Sobic001G319700 Sobic007G067600--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic007G067600--Sobic010G102300 Sobic005G101800 Sobic005G101800 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic003G426000 Sobic003G426000 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic010G084700--Sobic004G221500 Sobic010G084100 Sobic010G084100 Sobic010G084700--Sobic010G084100 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic008G136400 Sobic008G136400 Sobic006G275200--Sobic008G136400 Sobic006G275200--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic006G275200--Sobic009G008900 Sobic006G275200--Sobic006G173900 Sobic001G097600 Sobic001G097600 Sobic006G275200--Sobic001G097600 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic001G038900 Sobic001G038900 Sobic006G275200--Sobic001G038900 Sobic009G061200--Sobic004G216600 Sobic009G061200--Sobic009G183400 Sobic001G476500 Sobic001G476500 Sobic009G061200--Sobic001G476500 Sobic009G061200--Sobic001G119400 Sobic009G061200--Sobic001G423800 Sobic009G061200--Sobic002G361100 Sobic002G188900 Sobic002G188900 Sobic009G061200--Sobic002G188900 Sobic009G061200--Sobic009G008900 Sobic004G100700 Sobic004G100700 Sobic009G061200--Sobic004G100700 Sobic002G261000--Sobic001G317000 Sobic002G261000--Sobic006G275200 Sobic002G261000--Sobic001G119400 Sobic002G261000--Sobic004G216600 Sobic002G261000--Sobic009G008900 Sobic002G261000--Sobic001G097600 Sobic002G261000--Sobic001G319600 Sobic003G297600 Sobic003G297600 Sobic002G261000--Sobic003G297600 Sobic002G261000--Sobic001G317200 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic007G135201 Sobic007G135201 Sobic001G231600--Sobic007G135201 Sobic001G231600--Sobic007G067600 Sobic001G231600--Sobic001G495164 Sobic006G084600 Sobic006G084600 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic001G231600--Sobic010G102300 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic001G231600--Sobic004G221500
Octagon: transcription factors


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