Gene annotation
Transcriptome id Sobic.006G275200.1,Sobic.006G275200.2,Sobic.006G275200.3
Synonym Sb06g033660
Functional annotation CHCH domain containing protein, expressed
UniProt A0A1Z5RFY9 , C5YB04 , A0A1Z5RGX3
Pfam -
Panther DB PTHR37750 PTHR37750:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G23760 : Cox19-like CHCH family protein
RAP-DB (Rice) LOC_Os01g12464.1 : CHCH domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G030350.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G136400 expressed protein -
2 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
3 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
4 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
5 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
6 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
8 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
10 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
11 Sobic.001G423800 DNA binding protein, putative, expressed -
12 Sobic.010G099900 expressed protein -
13 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
14 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.004G280200 tobamovirus multiplication protein, putative, expressed -
16 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
17 Sobic.002G261000 expressed protein -
18 Sobic.001G108200 expressed protein -
19 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.003G369100 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G275200 Sobic006G275200 Sobic008G136400 Sobic008G136400 Sobic006G275200--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic006G275200--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic006G275200--Sobic009G008900 Sobic006G173900 Sobic006G173900 Sobic006G275200--Sobic006G173900 Sobic001G097600 Sobic001G097600 Sobic006G275200--Sobic001G097600 Sobic001G119400 Sobic001G119400 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic001G038900 Sobic001G038900 Sobic006G275200--Sobic001G038900 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic002G140400 Sobic002G140400 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic002G393000--Sobic001G119400 Sobic002G393000--Sobic006G275200 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G414600 Sobic002G414600 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic009G008900--Sobic002G414600 Sobic009G008900--Sobic001G038900 Sobic006G173900--Sobic009G008900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic001G097600--Sobic009G183400 Sobic001G097600--Sobic006G275200 Sobic001G097600--Sobic002G414600 Sobic001G097600--Sobic001G317000 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic001G097600--Sobic008G136400 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic004G336500 Sobic004G336500 Sobic003G367200--Sobic004G336500 Sobic003G367200--Sobic006G275200 Sobic003G086600 Sobic003G086600 Sobic003G367200--Sobic003G086600 Sobic003G382800 Sobic003G382800 Sobic003G367200--Sobic003G382800 Sobic001G397200 Sobic001G397200 Sobic003G367200--Sobic001G397200 Sobic004G280200 Sobic004G280200 Sobic003G367200--Sobic004G280200 Sobic007G015600 Sobic007G015600 Sobic003G367200--Sobic007G015600 Sobic003G367200--Sobic001G140900 Sobic003G369100 Sobic003G369100 Sobic003G367200--Sobic003G369100 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G317000--Sobic001G423800 Sobic001G317000--Sobic006G275200 Sobic001G317000--Sobic001G119400 Sobic002G195400 Sobic002G195400 Sobic001G317000--Sobic002G195400 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic001G317000--Sobic009G183400 Sobic001G317000--Sobic001G038900 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic003G345100 Sobic003G345100 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400
Octagon: transcription factors


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