Gene annotation
Transcriptome id Sobic.002G261000.1
Synonym Sb02g029570
Functional annotation expressed protein
UniProt A0A1B6QDJ4
Pfam -
Panther DB PTHR33450 PTHR33450:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47920 : -
RAP-DB (Rice) LOC_Os09g33640.1 : expressed protein
MaizeGDB (Corn) Zm00025a047612
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G275200 CHCH domain containing protein, expressed -
3 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
7 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
9 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
11 Sobic.008G136400 expressed protein -
12 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
13 Sobic.001G423800 DNA binding protein, putative, expressed -
14 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
15 Sobic.006G127900 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.004G088551 - -
17 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
18 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
19 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
20 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78


Gene co-expression network
sample Sobic002G261000 Sobic002G261000 Sobic001G317000 Sobic001G317000 Sobic002G261000--Sobic001G317000 Sobic006G275200 Sobic006G275200 Sobic002G261000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic002G261000--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic002G261000--Sobic004G216600 Sobic009G008900 Sobic009G008900 Sobic002G261000--Sobic009G008900 Sobic001G097600 Sobic001G097600 Sobic002G261000--Sobic001G097600 Sobic001G319600 Sobic001G319600 Sobic002G261000--Sobic001G319600 Sobic003G297600 Sobic003G297600 Sobic002G261000--Sobic003G297600 Sobic001G317200 Sobic001G317200 Sobic002G261000--Sobic001G317200 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic001G317000--Sobic006G275200 Sobic001G317000--Sobic001G119400 Sobic002G195400 Sobic002G195400 Sobic001G317000--Sobic002G195400 Sobic001G317000--Sobic001G097600 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic008G136400 Sobic008G136400 Sobic006G275200--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic006G275200--Sobic002G393000 Sobic006G275200--Sobic009G008900 Sobic006G173900 Sobic006G173900 Sobic006G275200--Sobic006G173900 Sobic006G275200--Sobic001G097600 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic006G275200--Sobic001G317000 Sobic006G275200--Sobic001G038900 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic004G216600--Sobic001G119400 Sobic004G216600--Sobic001G319600 Sobic004G216600--Sobic001G317200 Sobic004G216600--Sobic009G183400 Sobic004G216600--Sobic002G393000 Sobic004G221500 Sobic004G221500 Sobic004G216600--Sobic004G221500 Sobic004G216600--Sobic001G423800 Sobic001G348700 Sobic001G348700 Sobic004G216600--Sobic001G348700 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic002G414600 Sobic002G414600 Sobic009G008900--Sobic002G414600 Sobic009G008900--Sobic001G038900 Sobic001G097600--Sobic009G183400 Sobic001G097600--Sobic006G275200 Sobic001G097600--Sobic002G414600 Sobic001G097600--Sobic001G317000 Sobic001G097600--Sobic003G367200 Sobic001G097600--Sobic001G038900 Sobic001G097600--Sobic001G119400 Sobic001G097600--Sobic004G216600 Sobic001G097600--Sobic008G136400 Sobic001G319600--Sobic004G216600 Sobic002G361100 Sobic002G361100 Sobic001G319600--Sobic002G361100 Sobic007G067600 Sobic007G067600 Sobic001G319600--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic001G319600--Sobic010G084700 Sobic001G319600--Sobic006G275200 Sobic001G319600--Sobic009G061200 Sobic001G319600--Sobic002G261000 Sobic001G319600--Sobic006G173900 Sobic001G231600 Sobic001G231600 Sobic001G319600--Sobic001G231600 Sobic009G077800 Sobic009G077800 Sobic003G297600--Sobic009G077800 Sobic003G297600--Sobic009G139400 Sobic001G070800 Sobic001G070800 Sobic003G297600--Sobic001G070800 Sobic005G029200 Sobic005G029200 Sobic003G297600--Sobic005G029200 Sobic004G189400 Sobic004G189400 Sobic003G297600--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic003G297600--Sobic008G050600 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic002G055700 Sobic002G055700 Sobic003G297600--Sobic002G055700 Sobic005G051200 Sobic005G051200 Sobic001G317200--Sobic005G051200 Sobic001G317200--Sobic006G099900 Sobic003G252800 Sobic003G252800 Sobic001G317200--Sobic003G252800 Sobic010G084400 Sobic010G084400 Sobic001G317200--Sobic010G084400 Sobic003G286600 Sobic003G286600 Sobic001G317200--Sobic003G286600 Sobic001G317200--Sobic008G050600 Sobic003G240600 Sobic003G240600 Sobic001G317200--Sobic003G240600 Sobic005G101800 Sobic005G101800 Sobic001G317200--Sobic005G101800 Sobic002G416600 Sobic002G416600 Sobic001G317200--Sobic002G416600
Octagon: transcription factors


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