Gene annotation
Transcriptome id Sobic.002G195400.1
Synonym ELI3-1, CAD7, Sb02g024190, ATCAD7, ELI3, SbCAD4;SbCAD8-4;SbCAD3;SbCAD3
Functional annotation "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues" (PubMedID : 28606901)
Cinnamyl alcohol dehydrogenase (PubMedID : 19087955)
a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)
Protein mannitol dehydrogenase (Os) (PubMedID : 27208977)
dehydrogenase, putative, expressed
UniProt C5XC49
Pfam PF00107 PF08240
Panther DB PTHR11695 PTHR11695:SF563
NCBI CDD KOG0023; Alcohol dehydrogenase, class V
KEGG Orthology K00083; cinnamyl-alcohol dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G37980 : elicitor-activated gene 3-1
RAP-DB (Rice) LOC_Os09g23560.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a046898 , Zm00025a046897 , Zm00025a046899
Brachypodium KQJ90153
Barley HORVU5Hr1G062030.14 , HORVU5Hr1G062030.15 , HORVU5Hr1G062030.10 , HORVU5Hr1G062030.11 , HORVU5Hr1G062030.12 , HORVU5Hr1G062030.13 , HORVU6Hr1G032760.1 , HORVU6Hr1G032760.2 , HORVU6Hr1G032760.3 , HORVU0Hr1G012860.6 , HORVU0Hr1G012860.5 , HORVU0Hr1G012860.4 , HORVU0Hr1G012860.3 , HORVU0Hr1G012860.2 , HORVU0Hr1G012860.1 , HORVU5Hr1G062030.8 , HORVU5Hr1G062030.9 , HORVU5Hr1G062030.6 , HORVU5Hr1G062030.7 , HORVU5Hr1G062030.4 , HORVU5Hr1G062030.5 , HORVU5Hr1G062030.2 , HORVU5Hr1G062030.3 , HORVU5Hr1G062030.1 , HORVU0Hr1G012940.8 , HORVU0Hr1G012940.1 , HORVU0Hr1G012940.2 , HORVU0Hr1G012940.3 , HORVU0Hr1G012940.4 , HORVU0Hr1G012940.5 , HORVU0Hr1G012940.6 , HORVU0Hr1G012940.7
Wheat TraesCS5D02G210700 , TraesCS5A02G213900 , TraesCS5A02G213900 , TraesCS5A02G213900 , TraesCS5A02G205600 , TraesCS5B02G209800 , TraesCS5B02G209800 , TraesCS5B02G209800 , TraesCS5B02G202800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
2 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.007G066932 - -
5 Sobic.010G102300 expressed protein -
6 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.007G067350 - -
8 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
10 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
12 Sobic.004G088551 - -
13 Sobic.010G035700 expressed protein -
14 Sobic.007G135201 - -
15 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
16 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
17 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
18 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
19 Sobic.009G128700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
20 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G195400 Sobic002G195400 Sobic007G067600 Sobic007G067600 Sobic002G195400--Sobic007G067600 Sobic001G319700 Sobic001G319700 Sobic002G195400--Sobic001G319700 Sobic003G426100 Sobic003G426100 Sobic002G195400--Sobic003G426100 Sobic007G066932 Sobic007G066932 Sobic002G195400--Sobic007G066932 Sobic010G102300 Sobic010G102300 Sobic002G195400--Sobic010G102300 Sobic003G426000 Sobic003G426000 Sobic002G195400--Sobic003G426000 Sobic007G067350 Sobic007G067350 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic004G304300 Sobic004G304300 Sobic002G195400--Sobic004G304300 Sobic007G067600--Sobic002G195400 Sobic007G067600--Sobic007G066932 Sobic007G067600--Sobic001G319700 Sobic007G067600--Sobic010G102300 Sobic005G101800 Sobic005G101800 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic010G035700 Sobic010G035700 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic007G135201 Sobic007G135201 Sobic003G426100--Sobic007G135201 Sobic003G426100--Sobic007G067600 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic006G084600 Sobic006G084600 Sobic007G066932--Sobic006G084600 Sobic007G066932--Sobic007G135201 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic003G426000--Sobic002G195400 Sobic009G128700 Sobic009G128700 Sobic003G426000--Sobic009G128700 Sobic003G426000--Sobic007G067600 Sobic003G426000--Sobic004G304300 Sobic003G426000--Sobic003G430600 Sobic003G426300 Sobic003G426300 Sobic003G426000--Sobic003G426300 Sobic003G426000--Sobic005G101800 Sobic003G426000--Sobic001G319700 Sobic003G200700 Sobic003G200700 Sobic003G426000--Sobic003G200700 Sobic007G067350--Sobic007G066932 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic007G067350--Sobic010G102300 Sobic008G140300 Sobic008G140300 Sobic007G067350--Sobic008G140300 Sobic010G084300 Sobic010G084300 Sobic007G067350--Sobic010G084300 Sobic007G067350--Sobic001G319700 Sobic007G067350--Sobic010G035700 Sobic004G088551 Sobic004G088551 Sobic001G317000--Sobic004G088551 Sobic001G423800 Sobic001G423800 Sobic001G317000--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic001G317000--Sobic006G275200 Sobic001G119400 Sobic001G119400 Sobic001G317000--Sobic001G119400 Sobic001G317000--Sobic002G195400 Sobic001G097600 Sobic001G097600 Sobic001G317000--Sobic001G097600 Sobic002G261000 Sobic002G261000 Sobic001G317000--Sobic002G261000 Sobic009G183400 Sobic009G183400 Sobic001G317000--Sobic009G183400 Sobic001G038900 Sobic001G038900 Sobic001G317000--Sobic001G038900 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic004G304300--Sobic005G101800 Sobic004G304300--Sobic009G128700
Octagon: transcription factors


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