Gene annotation
Transcriptome id Sobic.010G035700.1
Synonym
Functional annotation expressed protein
UniProt A0A194YH64
Pfam -
Panther DB PTHR33120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g05420.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.010G102300 expressed protein -
3 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.007G066932 - -
5 Sobic.007G067350 - -
6 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
7 Sobic.007G135201 - -
8 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.004G180301 - -
10 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
11 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.005G169100 cytochrome P450, putative, expressed -
14 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
15 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
16 Sobic.007G015800 - -
17 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
18 Sobic.003G176350 - -
19 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic010G035700 Sobic010G035700 Sobic003G426100 Sobic003G426100 Sobic010G035700--Sobic003G426100 Sobic010G102300 Sobic010G102300 Sobic010G035700--Sobic010G102300 Sobic001G319700 Sobic001G319700 Sobic010G035700--Sobic001G319700 Sobic007G066932 Sobic007G066932 Sobic010G035700--Sobic007G066932 Sobic007G067350 Sobic007G067350 Sobic010G035700--Sobic007G067350 Sobic002G195400 Sobic002G195400 Sobic010G035700--Sobic002G195400 Sobic007G135201 Sobic007G135201 Sobic010G035700--Sobic007G135201 Sobic004G304300 Sobic004G304300 Sobic010G035700--Sobic004G304300 Sobic004G180301 Sobic004G180301 Sobic010G035700--Sobic004G180301 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic003G426100--Sobic007G067600 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic003G426000 Sobic003G426000 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic007G066932--Sobic007G067350 Sobic007G066932--Sobic003G426100 Sobic007G066932--Sobic002G195400 Sobic007G066932--Sobic010G102300 Sobic007G066932--Sobic007G067600 Sobic007G066932--Sobic004G304300 Sobic007G066932--Sobic001G319700 Sobic006G084600 Sobic006G084600 Sobic007G066932--Sobic006G084600 Sobic007G066932--Sobic007G135201 Sobic007G067350--Sobic007G066932 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic007G067350--Sobic010G102300 Sobic008G140300 Sobic008G140300 Sobic007G067350--Sobic008G140300 Sobic010G084300 Sobic010G084300 Sobic007G067350--Sobic010G084300 Sobic007G067350--Sobic001G319700 Sobic007G067350--Sobic010G035700 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic007G135201--Sobic003G426100 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic005G101800 Sobic005G101800 Sobic004G304300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic004G304300--Sobic009G128700 Sobic004G180301--Sobic010G035700 Sobic004G180301--Sobic003G426100 Sobic004G180301--Sobic004G304300 Sobic007G015800 Sobic007G015800 Sobic004G180301--Sobic007G015800 Sobic004G180301--Sobic010G102300 Sobic004G180301--Sobic001G319700 Sobic004G180301--Sobic007G066932 Sobic010G102200 Sobic010G102200 Sobic004G180301--Sobic010G102200 Sobic004G180301--Sobic002G195400
Octagon: transcription factors


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