Gene annotation
| Transcriptome id | Sobic.008G140300.1 |
|---|---|
| Synonym | Sb08g019110 |
| Functional annotation | nucleotide pyrophosphatase/phosphodiesterase, putative, expressed |
| UniProt | A0A1B6PDP5 |
| Pfam | PF16656 PF14008 PF00149 |
| Panther DB | PTHR22953 PTHR22953:SF44 |
| NCBI CDD | KOG1378; Purple acid phosphatase |
| KEGG Orthology | - |
| Gene Ontology | GO:0016787; hydrolase activity |
Orthologs (automatic annotation)
| TAIR | AT1G13750 : Purple acid phosphatases superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g38750.2 : nucleotide pyrophosphatase/phosphodiesterase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a014639 |
| Brachypodium | KQJ86181 , KQJ86180 |
| Barley | HORVU5Hr1G020400.5 , HORVU5Hr1G020400.3 , HORVU5Hr1G020400.2 , HORVU5Hr1G020400.9 , HORVU5Hr1G020400.11 , HORVU5Hr1G020400.10 , HORVU5Hr1G020400.13 , HORVU5Hr1G020400.12 , HORVU5Hr1G020400.15 , HORVU5Hr1G020400.16 |
| Wheat | TraesCS5B02G083700 , TraesCS5B02G082700 , TraesCS5B02G083600 , TraesCS5A02G082400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G067350 | - | - |
| 2 | Sobic.001G348700 | - | - |
| 3 | Sobic.006G084600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed | - |
| 4 | Sobic.002G183100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 5 | Sobic.007G067400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed | - |
| 6 | Sobic.004G221500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein | K13113: UBL5, ubiquitin-like protein 5 |
| 7 | Sobic.007G066932 | - | - |
| 8 | Sobic.010G084600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed | K05894: 12-oxophytodienoic acid reductase |
| 9 | Sobic.010G084300 | highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed | K05894: 12-oxophytodienoic acid reductase |
| 10 | Sobic.003G426100 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 11 | Sobic.003G437200 | sulfotransferase domain containing protein, expressed | - |
| 12 | Sobic.002G195400 | "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed | K00083: cinnamyl-alcohol dehydrogenase |
| 13 | Sobic.006G107200 | molybdopterin biosynthesis protein CNX3, putative, expressed | K03639: moaA, GTP 3',8-cyclase |
| 14 | Sobic.001G487300 | expressed protein | - |
| 15 | Sobic.003G252800 | hypothetical protein | - |
| 16 | Sobic.002G184200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed | - |
| 17 | Sobic.001G365100 | lipase, putative, expressed | - |
| 18 | Sobic.007G135201 | - | - |
| 19 | Sobic.001G231600 | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed | K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase |
| 20 | Sobic.002G041400 | ATP/GTP binding protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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