Gene annotation
Transcriptome id Sobic.007G067400.4,Sobic.007G067400.3
Synonym Sb07g005340
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Cupin domain containing protein, expressed
UniProt A0A1Z5R8C2
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G14630 : germin-like protein 9
RAP-DB (Rice) LOC_Os08g08990.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054791 , Zm00025a054792 , Zm00025a029970 , Zm00025a029971 , Zm00025a029972 , Zm00025a029973 , Zm00025a029974 , Zm00025a029975
Brachypodium KQJ95106
Barley -
Wheat TraesCSU02G253400 , TraesCSU02G222000 , TraesCS5A02G544500 , TraesCS3D02G011000 , TraesCS3A02G012400 , TraesCS4B02G377100 , TraesCSU02G145300 , TraesCS4B02G377400 , TraesCS5A02G544400 , TraesCSU02G145700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G184200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
3 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
4 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
5 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
6 Sobic.005G045900 - -
7 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
8 Sobic.001G348700 - -
9 Sobic.007G155100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
10 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
11 Sobic.002G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.007G067350 - -
14 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
15 Sobic.003G252800 hypothetical protein -
16 Sobic.001G365100 lipase, putative, expressed -
17 Sobic.002G139400 AP2 domain containing protein, expressed -
18 Sobic.003G307801 - -
19 Sobic.005G051500 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.009G144600 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic007G067400 Sobic007G067400 Sobic002G184200 Sobic002G184200 Sobic007G067400--Sobic002G184200 Sobic010G084100 Sobic010G084100 Sobic007G067400--Sobic010G084100 Sobic004G221500 Sobic004G221500 Sobic007G067400--Sobic004G221500 Sobic010G084300 Sobic010G084300 Sobic007G067400--Sobic010G084300 Sobic006G084600 Sobic006G084600 Sobic007G067400--Sobic006G084600 Sobic005G045900 Sobic005G045900 Sobic007G067400--Sobic005G045900 Sobic008G140300 Sobic008G140300 Sobic007G067400--Sobic008G140300 Sobic001G348700 Sobic001G348700 Sobic007G067400--Sobic001G348700 Sobic007G155100 Sobic007G155100 Sobic007G067400--Sobic007G155100 Sobic009G224100 Sobic009G224100 Sobic002G184200--Sobic009G224100 Sobic002G139400 Sobic002G139400 Sobic002G184200--Sobic002G139400 Sobic004G243100 Sobic004G243100 Sobic002G184200--Sobic004G243100 Sobic002G184200--Sobic004G221500 Sobic002G184200--Sobic007G067400 Sobic010G084700 Sobic010G084700 Sobic002G184200--Sobic010G084700 Sobic007G155200 Sobic007G155200 Sobic002G184200--Sobic007G155200 Sobic002G184200--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic002G184200--Sobic001G423800 Sobic010G084100--Sobic010G084700 Sobic004G071650 Sobic004G071650 Sobic010G084100--Sobic004G071650 Sobic010G084100--Sobic005G045900 Sobic010G084100--Sobic004G221500 Sobic003G286600 Sobic003G286600 Sobic010G084100--Sobic003G286600 Sobic001G192200 Sobic001G192200 Sobic010G084100--Sobic001G192200 Sobic010G084100--Sobic002G184200 Sobic010G084100--Sobic007G067400 Sobic006G099900 Sobic006G099900 Sobic010G084100--Sobic006G099900 Sobic004G221500--Sobic010G084700 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic004G221500--Sobic002G184200 Sobic004G221500--Sobic001G423800 Sobic004G221500--Sobic010G084100 Sobic003G252800 Sobic003G252800 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic010G117900 Sobic010G117900 Sobic004G221500--Sobic010G117900 Sobic007G067350 Sobic007G067350 Sobic010G084300--Sobic007G067350 Sobic003G430600 Sobic003G430600 Sobic010G084300--Sobic003G430600 Sobic010G084300--Sobic006G084600 Sobic003G200700 Sobic003G200700 Sobic010G084300--Sobic003G200700 Sobic007G066932 Sobic007G066932 Sobic010G084300--Sobic007G066932 Sobic007G227300 Sobic007G227300 Sobic010G084300--Sobic007G227300 Sobic010G084300--Sobic007G067400 Sobic009G240600 Sobic009G240600 Sobic010G084300--Sobic009G240600 Sobic007G067600 Sobic007G067600 Sobic010G084300--Sobic007G067600 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic006G084600--Sobic007G155100 Sobic003G317100 Sobic003G317100 Sobic006G084600--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic006G084600--Sobic003G437200 Sobic006G084600--Sobic007G066932 Sobic006G084600--Sobic001G348700 Sobic006G084600--Sobic010G084300 Sobic001G231600 Sobic001G231600 Sobic006G084600--Sobic001G231600 Sobic005G045900--Sobic010G084100 Sobic005G045900--Sobic003G286600 Sobic005G045900--Sobic004G221500 Sobic005G045900--Sobic003G317100 Sobic005G045900--Sobic010G084700 Sobic005G045900--Sobic007G155200 Sobic010G044400 Sobic010G044400 Sobic005G045900--Sobic010G044400 Sobic005G045900--Sobic006G084600 Sobic005G045900--Sobic004G071650 Sobic008G140300--Sobic007G067350 Sobic008G140300--Sobic001G348700 Sobic008G140300--Sobic006G084600 Sobic002G183100 Sobic002G183100 Sobic008G140300--Sobic002G183100 Sobic008G140300--Sobic007G067400 Sobic008G140300--Sobic004G221500 Sobic008G140300--Sobic007G066932 Sobic010G084600 Sobic010G084600 Sobic008G140300--Sobic010G084600 Sobic008G140300--Sobic010G084300 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic005G206601 Sobic005G206601 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic001G348700--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic001G348700--Sobic001G317200 Sobic007G155100--Sobic001G423800 Sobic001G402200 Sobic001G402200 Sobic007G155100--Sobic001G402200 Sobic001G018300 Sobic001G018300 Sobic007G155100--Sobic001G018300 Sobic001G365100 Sobic001G365100 Sobic007G155100--Sobic001G365100 Sobic007G155100--Sobic004G243100 Sobic007G155100--Sobic006G084600 Sobic010G066700 Sobic010G066700 Sobic007G155100--Sobic010G066700 Sobic007G155100--Sobic004G221500 Sobic007G155100--Sobic002G184200
Octagon: transcription factors


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