Gene annotation
Transcriptome id Sobic.010G117900.1
Synonym Sb10g010420
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1W0VSK2
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF12
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60690 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os04g27060.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005311 , Zm00025a041363 , Zm00025a014620 , Zm00025a038451 , Zm00025a038544
Brachypodium KQK07543
Barley HORVU2Hr1G082740.1 , HORVU2Hr1G082740.3 , HORVU2Hr1G082740.2 , HORVU2Hr1G082740.5 , HORVU2Hr1G082740.4 , HORVU2Hr1G082740.7 , HORVU2Hr1G082740.6
Wheat TraesCS2D02G336900 , TraesCS2B02G356100 , TraesCS2D02G336700 , TraesCS5B02G523200 , TraesCS2A02G326100 , TraesCS2D02G336800 , TraesCS4A02G349500 , TraesCS4A02G349500 , TraesCS5D02G522300 , TraesCS2B02G355900 , TraesCS2A02G325800 , TraesCS2A02G325800
Populus -


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cDNA sequences
Sobic.010G117900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
2 Sobic.003G252800 hypothetical protein -
3 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
4 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
6 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
7 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
8 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.001G348700 - -
10 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.003G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@WRKY27, expressed -
12 Sobic.004G088551 - -
13 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G206601 - -
16 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
17 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
19 Sobic.003G426300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G084100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic010G117900 Sobic010G117900 Sobic005G101800 Sobic005G101800 Sobic010G117900--Sobic005G101800 Sobic003G252800 Sobic003G252800 Sobic010G117900--Sobic003G252800 Sobic010G084700 Sobic010G084700 Sobic010G117900--Sobic010G084700 Sobic007G227300 Sobic007G227300 Sobic010G117900--Sobic007G227300 Sobic004G221500 Sobic004G221500 Sobic010G117900--Sobic004G221500 Sobic010G084400 Sobic010G084400 Sobic010G117900--Sobic010G084400 Sobic007G067600 Sobic007G067600 Sobic010G117900--Sobic007G067600 Sobic002G195400 Sobic002G195400 Sobic010G117900--Sobic002G195400 Sobic001G348700 Sobic001G348700 Sobic010G117900--Sobic001G348700 Sobic005G101800--Sobic010G084400 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic001G317200 Sobic001G317200 Sobic005G101800--Sobic001G317200 Sobic003G426300 Sobic003G426300 Sobic005G101800--Sobic003G426300 Sobic006G099900 Sobic006G099900 Sobic005G101800--Sobic006G099900 Sobic009G128700 Sobic009G128700 Sobic005G101800--Sobic009G128700 Sobic001G400800 Sobic001G400800 Sobic005G101800--Sobic001G400800 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic003G252800--Sobic009G128700 Sobic003G252800--Sobic004G221500 Sobic010G084700--Sobic004G221500 Sobic010G084100 Sobic010G084100 Sobic010G084700--Sobic010G084100 Sobic010G084700--Sobic010G117900 Sobic002G184200 Sobic002G184200 Sobic010G084700--Sobic002G184200 Sobic010G176600 Sobic010G176600 Sobic010G084700--Sobic010G176600 Sobic003G286600 Sobic003G286600 Sobic010G084700--Sobic003G286600 Sobic010G084700--Sobic001G348700 Sobic001G423800 Sobic001G423800 Sobic010G084700--Sobic001G423800 Sobic001G192200 Sobic001G192200 Sobic010G084700--Sobic001G192200 Sobic007G227300--Sobic006G099900 Sobic003G200700 Sobic003G200700 Sobic007G227300--Sobic003G200700 Sobic007G227300--Sobic001G400800 Sobic007G227300--Sobic003G252800 Sobic006G268800 Sobic006G268800 Sobic007G227300--Sobic006G268800 Sobic006G277600 Sobic006G277600 Sobic007G227300--Sobic006G277600 Sobic004G148200 Sobic004G148200 Sobic007G227300--Sobic004G148200 Sobic009G240600 Sobic009G240600 Sobic007G227300--Sobic009G240600 Sobic005G206601 Sobic005G206601 Sobic007G227300--Sobic005G206601 Sobic004G221500--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic004G221500--Sobic002G184200 Sobic004G221500--Sobic001G423800 Sobic004G221500--Sobic010G084100 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic004G221500--Sobic010G117900 Sobic010G084400--Sobic003G252800 Sobic010G084400--Sobic005G101800 Sobic010G084400--Sobic006G099900 Sobic010G084400--Sobic001G317200 Sobic010G084400--Sobic009G128700 Sobic010G084400--Sobic007G227300 Sobic010G084400--Sobic010G117900 Sobic010G239300 Sobic010G239300 Sobic010G084400--Sobic010G239300 Sobic004G189400 Sobic004G189400 Sobic010G084400--Sobic004G189400 Sobic007G067600--Sobic002G195400 Sobic007G066932 Sobic007G066932 Sobic007G067600--Sobic007G066932 Sobic001G319700 Sobic001G319700 Sobic007G067600--Sobic001G319700 Sobic010G102300 Sobic010G102300 Sobic007G067600--Sobic010G102300 Sobic007G067600--Sobic005G101800 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic003G426000 Sobic003G426000 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic003G426100 Sobic003G426100 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic007G067350 Sobic007G067350 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic004G304300 Sobic004G304300 Sobic002G195400--Sobic004G304300 Sobic001G348700--Sobic003G252800 Sobic001G348700--Sobic004G221500 Sobic001G348700--Sobic010G084700 Sobic001G348700--Sobic006G084600 Sobic001G348700--Sobic010G117900 Sobic001G348700--Sobic005G206601 Sobic004G216600 Sobic004G216600 Sobic001G348700--Sobic004G216600 Sobic001G348700--Sobic006G099900 Sobic001G348700--Sobic001G317200
Octagon: transcription factors


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