Gene annotation
Transcriptome id Sobic.001G231600.1
Synonym Sb01g020300
Functional annotation oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
UniProt C5WZI6
Pfam PF08659
Panther DB PTHR24322 PTHR24322:SF561
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology K00059; fabG, 3-oxoacyl-[acyl-carrier protein] reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13180 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os10g31780.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a006738
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G135201 - -
2 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
3 Sobic.001G495164 - -
4 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
5 Sobic.007G067350 - -
6 Sobic.010G102300 expressed protein -
7 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.004G128400 O-methyltransferase, putative, expressed -
9 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
10 Sobic.007G066932 - -
11 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
12 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
13 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
16 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
17 Sobic.004G088551 - -
18 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.004G037000 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase


Gene co-expression network
sample Sobic001G231600 Sobic001G231600 Sobic007G135201 Sobic007G135201 Sobic001G231600--Sobic007G135201 Sobic007G067600 Sobic007G067600 Sobic001G231600--Sobic007G067600 Sobic001G495164 Sobic001G495164 Sobic001G231600--Sobic001G495164 Sobic006G084600 Sobic006G084600 Sobic001G231600--Sobic006G084600 Sobic007G067350 Sobic007G067350 Sobic001G231600--Sobic007G067350 Sobic010G102300 Sobic010G102300 Sobic001G231600--Sobic010G102300 Sobic002G195400 Sobic002G195400 Sobic001G231600--Sobic002G195400 Sobic004G128400 Sobic004G128400 Sobic001G231600--Sobic004G128400 Sobic004G221500 Sobic004G221500 Sobic001G231600--Sobic004G221500 Sobic003G426100 Sobic003G426100 Sobic007G135201--Sobic003G426100 Sobic007G135201--Sobic001G231600 Sobic007G066932 Sobic007G066932 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic010G035700 Sobic010G035700 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600 Sobic007G067600--Sobic002G195400 Sobic007G067600--Sobic007G066932 Sobic001G319700 Sobic001G319700 Sobic007G067600--Sobic001G319700 Sobic007G067600--Sobic010G102300 Sobic005G101800 Sobic005G101800 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic003G426000 Sobic003G426000 Sobic007G067600--Sobic003G426000 Sobic007G067600--Sobic001G495164 Sobic001G495164--Sobic007G067600 Sobic001G495164--Sobic001G231600 Sobic001G330500 Sobic001G330500 Sobic001G495164--Sobic001G330500 Sobic001G495164--Sobic010G102300 Sobic001G495164--Sobic005G101800 Sobic001G495164--Sobic002G195400 Sobic001G495164--Sobic010G117900 Sobic001G495164--Sobic001G319700 Sobic003G164800 Sobic003G164800 Sobic001G495164--Sobic003G164800 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic007G155100 Sobic007G155100 Sobic006G084600--Sobic007G155100 Sobic003G317100 Sobic003G317100 Sobic006G084600--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic006G084600--Sobic003G437200 Sobic006G084600--Sobic007G066932 Sobic001G348700 Sobic001G348700 Sobic006G084600--Sobic001G348700 Sobic010G084300 Sobic010G084300 Sobic006G084600--Sobic010G084300 Sobic006G084600--Sobic001G231600 Sobic007G067350--Sobic007G066932 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic007G067350--Sobic010G102300 Sobic008G140300 Sobic008G140300 Sobic007G067350--Sobic008G140300 Sobic007G067350--Sobic010G084300 Sobic007G067350--Sobic001G319700 Sobic007G067350--Sobic010G035700 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic004G304300 Sobic004G304300 Sobic010G102300--Sobic004G304300 Sobic010G102300--Sobic001G231600 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic004G128400--Sobic001G231600 Sobic002G182500 Sobic002G182500 Sobic004G128400--Sobic002G182500 Sobic001G320400 Sobic001G320400 Sobic004G128400--Sobic001G320400 Sobic001G331301 Sobic001G331301 Sobic004G128400--Sobic001G331301 Sobic004G128400--Sobic007G135201 Sobic004G128400--Sobic001G495164 Sobic004G128400--Sobic010G117900 Sobic004G128400--Sobic007G067600 Sobic010G084700 Sobic010G084700 Sobic004G128400--Sobic010G084700 Sobic004G221500--Sobic010G084700 Sobic004G221500--Sobic006G084600 Sobic004G221500--Sobic001G348700 Sobic002G184200 Sobic002G184200 Sobic004G221500--Sobic002G184200 Sobic001G423800 Sobic001G423800 Sobic004G221500--Sobic001G423800 Sobic010G084100 Sobic010G084100 Sobic004G221500--Sobic010G084100 Sobic003G252800 Sobic003G252800 Sobic004G221500--Sobic003G252800 Sobic003G286600 Sobic003G286600 Sobic004G221500--Sobic003G286600 Sobic004G221500--Sobic010G117900
Octagon: transcription factors


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