Gene annotation
Transcriptome id Sobic.007G066932.1
Synonym -
Functional annotation -
UniProt C5YI23
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39110 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os12g05860.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029969 , Zm00025a054791 , Zm00025a054792 , Zm00025a029970 , Zm00025a029971 , Zm00025a029972 , Zm00025a029973 , Zm00025a029974 , Zm00025a029975
Brachypodium -
Barley HORVU7Hr1G091800.7 , HORVU7Hr1G091800.6 , HORVU7Hr1G091800.5 , HORVU7Hr1G091800.4 , HORVU7Hr1G091800.3 , HORVU7Hr1G091800.2 , HORVU7Hr1G091800.1 , HORVU7Hr1G091800.9 , HORVU7Hr1G091800.8
Wheat TraesCS4B02G378000 , TraesCS4B02G378300 , TraesCS4B02G378300 , TraesCSU02G128600 , TraesCSU02G151900 , TraesCS3D02G011000 , TraesCS5A02G545200 , TraesCSU02G128000 , TraesCS4B02G377900 , TraesCS4B02G377900 , TraesCSU02G128500 , TraesCSU02G128800 , TraesCSU02G127900 , TraesCS3A02G012400 , TraesCSU02G152000 , TraesCS4B02G378400 , TraesCS5D02G054300 , TraesCS4B02G378100 , TraesCS5B02G048500 , TraesCSU02G128400 , TraesCSU02G128200 , TraesCS5A02G044300 , TraesCSU02G172100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G067350 - -
2 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.002G195400 "Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@Protein mannitol dehydrogenase (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
4 Sobic.010G102300 expressed protein -
5 Sobic.007G067600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
6 Sobic.004G304300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K15095: (+)-neomenthol dehydrogenase
7 Sobic.001G319700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.006G084600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
9 Sobic.007G135201 - -
10 Sobic.010G035700 expressed protein -
11 Sobic.003G430600 OsCML19 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
12 Sobic.010G084300 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
13 Sobic.001G231600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
14 Sobic.003G426000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
16 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.001G330500 polygalacturonase inhibitor 1 precursor, putative, expressed -
18 Sobic.008G140300 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
19 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
20 Sobic.003G164800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic007G066932 Sobic007G066932 Sobic007G067350 Sobic007G067350 Sobic007G066932--Sobic007G067350 Sobic003G426100 Sobic003G426100 Sobic007G066932--Sobic003G426100 Sobic002G195400 Sobic002G195400 Sobic007G066932--Sobic002G195400 Sobic010G102300 Sobic010G102300 Sobic007G066932--Sobic010G102300 Sobic007G067600 Sobic007G067600 Sobic007G066932--Sobic007G067600 Sobic004G304300 Sobic004G304300 Sobic007G066932--Sobic004G304300 Sobic001G319700 Sobic001G319700 Sobic007G066932--Sobic001G319700 Sobic006G084600 Sobic006G084600 Sobic007G066932--Sobic006G084600 Sobic007G135201 Sobic007G135201 Sobic007G066932--Sobic007G135201 Sobic007G067350--Sobic007G066932 Sobic007G067350--Sobic002G195400 Sobic007G067350--Sobic003G426100 Sobic007G067350--Sobic006G084600 Sobic007G067350--Sobic010G102300 Sobic008G140300 Sobic008G140300 Sobic007G067350--Sobic008G140300 Sobic010G084300 Sobic010G084300 Sobic007G067350--Sobic010G084300 Sobic007G067350--Sobic001G319700 Sobic010G035700 Sobic010G035700 Sobic007G067350--Sobic010G035700 Sobic003G426100--Sobic007G066932 Sobic003G426100--Sobic002G195400 Sobic003G426100--Sobic010G035700 Sobic003G426100--Sobic010G102300 Sobic003G426100--Sobic007G067350 Sobic003G426100--Sobic004G304300 Sobic003G426100--Sobic001G319700 Sobic003G426100--Sobic007G135201 Sobic003G426100--Sobic007G067600 Sobic002G195400--Sobic007G067600 Sobic002G195400--Sobic001G319700 Sobic002G195400--Sobic003G426100 Sobic002G195400--Sobic007G066932 Sobic002G195400--Sobic010G102300 Sobic003G426000 Sobic003G426000 Sobic002G195400--Sobic003G426000 Sobic002G195400--Sobic007G067350 Sobic001G317000 Sobic001G317000 Sobic002G195400--Sobic001G317000 Sobic002G195400--Sobic004G304300 Sobic010G102300--Sobic001G319700 Sobic010G102300--Sobic002G195400 Sobic010G102300--Sobic010G035700 Sobic010G102300--Sobic007G066932 Sobic010G102300--Sobic003G426100 Sobic010G102300--Sobic007G067600 Sobic010G102300--Sobic007G067350 Sobic010G102300--Sobic004G304300 Sobic001G231600 Sobic001G231600 Sobic010G102300--Sobic001G231600 Sobic007G067600--Sobic002G195400 Sobic007G067600--Sobic007G066932 Sobic007G067600--Sobic001G319700 Sobic007G067600--Sobic010G102300 Sobic005G101800 Sobic005G101800 Sobic007G067600--Sobic005G101800 Sobic010G117900 Sobic010G117900 Sobic007G067600--Sobic010G117900 Sobic003G430600 Sobic003G430600 Sobic007G067600--Sobic003G430600 Sobic007G067600--Sobic003G426000 Sobic001G495164 Sobic001G495164 Sobic007G067600--Sobic001G495164 Sobic004G304300--Sobic007G066932 Sobic004G304300--Sobic003G426100 Sobic004G304300--Sobic002G195400 Sobic004G304300--Sobic003G426000 Sobic004G304300--Sobic010G102300 Sobic004G304300--Sobic007G067350 Sobic004G304300--Sobic001G319700 Sobic004G304300--Sobic005G101800 Sobic009G128700 Sobic009G128700 Sobic004G304300--Sobic009G128700 Sobic001G319700--Sobic010G102300 Sobic001G319700--Sobic002G195400 Sobic001G319700--Sobic007G067600 Sobic001G319700--Sobic003G426100 Sobic001G319700--Sobic007G066932 Sobic001G319700--Sobic010G035700 Sobic001G319700--Sobic007G067350 Sobic001G319700--Sobic003G426000 Sobic001G319700--Sobic004G304300 Sobic004G221500 Sobic004G221500 Sobic006G084600--Sobic004G221500 Sobic006G084600--Sobic007G067350 Sobic007G155100 Sobic007G155100 Sobic006G084600--Sobic007G155100 Sobic003G317100 Sobic003G317100 Sobic006G084600--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic006G084600--Sobic003G437200 Sobic006G084600--Sobic007G066932 Sobic001G348700 Sobic001G348700 Sobic006G084600--Sobic001G348700 Sobic006G084600--Sobic010G084300 Sobic006G084600--Sobic001G231600 Sobic007G135201--Sobic003G426100 Sobic007G135201--Sobic001G231600 Sobic007G135201--Sobic007G066932 Sobic007G135201--Sobic007G067600 Sobic007G135201--Sobic002G195400 Sobic007G135201--Sobic007G067350 Sobic007G135201--Sobic010G102300 Sobic007G135201--Sobic010G035700 Sobic007G135201--Sobic006G084600
Octagon: transcription factors


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